Anastrepha obliqua (West Indian fruit fly): 129243003
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Entry
129243003 CDS
T09777
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129243003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoq04131
]
129243003
Membrane trafficking [BR:
aoq04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129243003
Protein recycling
Other Rab GTPase associated proteins
129243003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
dCache_2
ACCA
DUF7342
Motif
Other DBs
NCBI-GeneID:
129243003
NCBI-ProteinID:
XP_054735982
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All DBs
Position
3:complement(13665358..13668388)
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AA seq
749 aa
AA seq
DB search
MSLARVPQLRIVQRDLKCRQGCGFYGNAQFDGLCSKCFRERNEKKKKADQKAGISTTHTT
TTDQSSGSGVISGAGRLSPQNLLGRSLSKRQESLPEISTGTLTKKKSLVPAVFQKTLQSS
VQKSKKLKQEVQLATGQRSYVPDPTESLFMLQLRQLRIPDDGKRKLKNEIQRLDNAIRSY
MNKSANKSIDELSELVQNAYTKLSDIVHNDQRFQIATNEDRESALDFFEKVVMTQNHKFL
FSPYFTLDEENDVKIQKRIRQLSWITAKHLMCSIDEVNAESRDLVYNAITELVGIDSYYS
PQEKLECTVRCCRHIFELLKHSVGGPASADEFLPALIFVVLKANPVRLHSNVNFVTRFTT
ASRLMSGEGGYYFTNLCCAISFIENLNAESLGISEEDFDLLMSGDKAFSTPWESALLACE
GLHLISENMKRMELLKKRNASIAAGIENFRKDLADFQCEIVDKVDACIAKAPLTILPIKT
PTHLISKAREHISNGNAVPLQSSISLGHYNTNLLAAIETNGKTTKGSVEKCLPIPLAPTS
TMESAAVDDAAHTLALKDTSISSVGRLSPLPAAQPSVDMLFTSPIFNYTPFDAVSLLDDH
SDSTDDFILNTDIRGGLTNVNYDFDLSDHSADNSVAEDLKLNLEEFDPLVQKPNEESASG
EAVSTGLQTPEKKVNPHERSLLDSDSPTNGALLPSPLKPTVAEYRGFSSFEIPSISCNTG
DFASLNHSVNERVDNTGAPNTVSENSAAK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggcacgcgtgcctcagctgcgtattgtgcagcgtgatctgaaatgtcggcag
ggatgtggattttatggaaatgcacaatttgacggtctctgctcgaaatgcttccgtgaa
cgtaacgaaaaaaagaaaaaagcggatcaaaaagcaggcatttctactacacatacaaca
actactgatcaaagtagtggtagtggtgtcatcagtggagccggacgcctgtcaccgcaa
aatctgttaggacgctcactaagcaagcggcaggaaagtttgccggaaatatcgactggc
actcttacgaagaagaaatccctagtgcctgccgtgttccaaaaaacactccaatcaagt
gtgcagaaaagtaagaagttaaaacaggaggtgcagctggcaacaggacaaagatcatat
gttcctgaccctacggagagtctgttcatgcttcagctgcgtcaactacggatacctgac
gatggcaagcgcaaactgaagaatgagattcaacgcttggataatgccatacgaagctat
atgaacaaaagcgctaataaaagcatagatgagctttcagagctggtgcaaaatgcctat
actaaactgtctgatattgtgcataacgaccaacgttttcaaattgcaactaatgaagat
cgcgaaagtgcacttgacttctttgaaaaggttgtcatgacacaaaatcacaagttttta
ttcagtccctattttactctcgacgaagaaaacgatgtgaagattcagaaacgaatacga
caactcagttggataacagcgaaacatttaatgtgcagcattgacgaagtgaatgccgaa
tcgcgagatctagtctacaatgccataactgagttagtaggcatcgattcttattactca
ccacaagaaaaactagagtgcacagtgcgttgctgtcgtcatatattcgaattactcaaa
cactcagttggaggcccagcaagtgcagatgaatttttgcctgcactcattttcgttgta
ctgaaagcgaatccggtgcgtttgcacagtaatgtaaactttgtaacgcgttttactact
gcatcgcggttaatgagtggcgagggaggatattattttacaaatctgtgctgcgcaata
tccttcattgaaaatctaaatgccgaaagtctgggcatctcggaagaggactttgatcta
cttatgtcaggcgataaggcatttagtacaccttgggaaagcgctctgctcgcctgtgag
ggtttgcatttaatatcagaaaatatgaagcgtatggaattgttgaaaaaacgcaatgcg
agcatcgctgctggtattgagaatttccgtaaggacctcgcagactttcaatgcgaaatt
gtcgataaagtggatgcttgtattgccaaagctccgctgacaattctaccaataaaaaca
ccaacacatctgatcagtaaggcacgtgaacatatttctaatggaaatgctgtacctttg
caatcgagtatatcgcttggacactataacacgaatttgctcgccgctattgaaaccaac
ggcaaaacgacaaaaggtagtgtggaaaagtgccttcctattccattggcacccacaagt
acaatggaaagcgctgctgtagatgatgctgctcatacattggcgctaaaagacactagt
atatcttcagtcggtcgtttgtcgcctttaccagcagcacaaccatcagtagatatgcta
tttacatctcccattttcaactatacccctttcgatgccgtttccctgcttgacgatcac
tcggattccactgatgattttatactcaacacagatataagaggcggacttacaaatgta
aattatgactttgatttgtccgatcacagtgcagataatagtgttgctgaggatttgaaa
cttaacttggaagaattcgatccccttgtacaaaaaccaaatgaggaatcagcttcaggg
gaggcagtatcgactggtttgcaaacacctgaaaaaaaggttaatccccatgagcgaagt
ttattggacagtgactcaccaacaaatggagcattgctaccctcgccgctcaagcccact
gtagccgaatatcgtggcttttcgagtttcgaaataccttctatttcgtgcaacaccggt
gactttgcgtctctcaatcattcagtcaatgaacgtgtggacaatacaggggcgccaaac
actgtatctgaaaatagcgcagctaagtga
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