Anastrepha obliqua (West Indian fruit fly): 129243139
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Entry
129243139 CDS
T09777
Name
(RefSeq) uncharacterized protein LOC129243139
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129243139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129243139
03009 Ribosome biogenesis [BR:
aoq03009
]
129243139
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129243139
Spliceosome [BR:
aoq03041
]
Complex A
U1 snRNP components
U1 related factors
129243139
Complex B
129243139
Ribosome biogenesis [BR:
aoq03009
]
Eukaryotic type
Pre-60S particles
Helicases
129243139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
Utp25_C
Motif
Other DBs
NCBI-GeneID:
129243139
NCBI-ProteinID:
XP_054736275
LinkDB
All DBs
Position
3:complement(89155546..89167411)
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AA seq
721 aa
AA seq
DB search
MFDRRNGDRAGAGIGGMGGMGGNAGSGGYRDQQRGGPMRGNGLARPRPAPYGRGGIGGNG
APFRGGPPRGGNNDRRMDGSNNTGTPGERLPIIIWSEIKLTPFQKNFYQPSSTVVERSKT
DVDGFLSSNEVTLKGDSIPSPNIEFSEPGFPEHVLAEIKKMGFSKPTAIQAQGWPIALSG
RDMVGVAQTGSGKTLAYVLPAVVHISHQARLERGDGPIALILAPTRELAQQIQQVANDFG
SKTHVRNTCIFGGAPKQPQARDLERGVEIVIATPGRLLDFLERGVTNLRRCTYLVLDEAD
RMLDMGFEPQIRRIIKQIRPDRQVLMWSATWPKEVRNLAEEFLDNYIQINIGSLTLSANH
NILQIVDVCEENEKDNKLIKLLSEISAESETKTIIFVETKKRVDEITRIIGRSGWRVCAI
HGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGR
TGRSNNTGTAYTLFTTSNANKANDLIQVLREANQVINPRLVEMASSSGYNHKRNSRGGYQ
NRGGNHMGGGGMGYGNRGNRGYGNNIGGAIGAQSYQQRPQQTANVGSQMYQRPSGPPSRF
SAAPPPTGYERNQHSVGSKPYPEGGDKRPRFNPQQQPPQQPSAYQQQPPRMSYGGNNAHH
QPPPNHRAAPQAGASSASAMYTHAPPSHHQPAGAHYAVPSGFGAASGNMFAYPPPPLPVQ
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatagacgtaacggtgatcgcgcaggagctggaattggtggaatgggcggtatg
ggtggcaacgctgggagcggtggctatcgggatcagcaacgtggcggtccgatgcgcggc
aatggccttgcacgccctcgtcctgcaccatacgggcgtggagggatcggtggcaacggc
gctccgtttcgaggtggaccacctcgtggcggcaacaatgatcgtcgaatggatggcagc
aataacactggtacacccggggaacgtttgcctattataatttggtctgaaataaaatta
acaccgttccaaaaaaatttctatcaaccaagctccaccgttgttgagcgctcaaaaacc
gatgtagatggatttctctcatctaatgaggttacattgaaaggcgatagtattccatca
cctaatattgaatttagtgaacctggtttcccagaacatgttttagcagagattaagaag
atgggattttccaagccaactgctatacaagcgcagggttggccgatcgctctaagtgga
cgggacatggttggtgtggcacagaccggttcgggtaagacgctcgcttatgtgctaccc
gctgtagtacacatcagtcatcaggctcgcttagaacgtggtgatgggccaattgctttg
attttggcaccgacacgtgaactggctcaacaaatacaacaagttgcaaacgatttcggt
tcaaagactcatgtgcgcaacacttgcatattcggtggagcaccgaaacaaccacaggca
cgtgatttggaacgaggtgttgaaattgtgattgccacgcctggacgtctactcgatttt
ctagagagaggtgtgactaatttgcgccgttgtacctatttagtattggatgaggctgat
cgtatgcttgatatgggtttcgagccacaaatacggcgcataataaaacagattcgccca
gaccgtcaagtgctgatgtggtccgccacttggccaaaggaagtgcgcaatcttgctgag
gaatttcttgacaattatatacaaattaacattggatctctaacgctttcagccaatcat
aatatacttcaaatagtagatgtgtgcgaagagaatgaaaaagataataagcttataaag
cttttgtcagaaatttctgccgaatctgaaactaagacgatcatcttcgtagaaacaaag
aagcgtgttgatgaaataactcgtattattggccgtagtgggtggcgggtatgtgccatt
catggcgacaagtcgcagcaagagcgagattttgtattgtcctcattccgtaatggacga
cactcaattttggtggcgaccgatgttgcggcaaggggtctagatgttgacgatgttaaa
ttcgtaattaattacgattatccttcgaattcggaggactacgttcatcgcattgggcgt
acaggacgctcgaacaatacgggaacggcatacaccttattcaccacatcaaatgccaac
aaagctaatgacttgatacaagttctgcgcgaagcaaatcaggtcatcaatccgcgactt
gttgaaatggcatcatcttcgggctacaatcataagcgaaactcccgtggtggttatcaa
aatcgtggtggcaatcatatgggtggtggcggcatgggttatggcaatcgcggtaatcgt
ggttatggtaacaatattggtggagccattggcgctcagtcatatcaacagcgtccacaa
caaactgcaaatgtgggaagtcaaatgtatcaacgtccgagcggacctccgtctcggttt
tcagctgctcctcctccaactggctacgaacgcaaccagcactccgttggtagcaaaccc
taccccgagggtggtgataaacgcccgcgtttcaatccacaacaacagccgccacagcag
ccttcagcttatcaacaacaacccccacgcatgtcatatggcggaaataatgcacatcat
caaccgccaccaaatcaccgagcggcaccacaggcgggagcaagttccgcttccgcgatg
tatactcatgcacctccttcgcatcatcagccagcaggcgcccattatgccgttccctcc
ggatttggtgcggcatccggtaacatgtttgcctatcctccgcctccattgcccgtacaa
aactaa
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