Anastrepha obliqua (West Indian fruit fly): 129243410
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Entry
129243410 CDS
T09777
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129243410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129243410
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129243410
Complex C
U5 SnRNP specific factors
129243410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
129243410
NCBI-ProteinID:
XP_054736361
LinkDB
All DBs
Position
4:16959647..16974294
Genome browser
AA seq
2405 aa
AA seq
DB search
MSLPPYMIPPNAWAAQIMAQQQAQAYAAAAQVQQAQMHAHQMANQIQQIPPPGAPLPGPI
TNGNVGMPPGGIGGGGGISQAQLGQIPTPKPDIITEEKLQEKAQKWQQLQSKRFAEKRKF
GFVDAQKEDMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWE
QIRDVQVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDD
EEPPLDYADNVLDVEPLEAIQIDLDHEEDGAVYKWFYEHRPLVGTPYVNGSTYRKWNLTL
PQLATLYRLANQLLTDLVDDNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDHNVGDED
WNEFNDINKVIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYF
DPLINPISHRHAHTKIAEPMPDDDEDFSLPDEVQPFLQDTPLYTDNTANGIALLWAPRPF
NLRSGRSRRAIDVPLVKSWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRY
LFRSFKATKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLT
TKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGM
YRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERW
LGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQ
HLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTV
CKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFGPIPFPPLS
YKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAF
KEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLL
AYKWCQGINNLQDVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTA
KNNVVINYKDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRASEMAGPPQMPNDF
LTFQDTVTESAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNK
KCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTINWENTFVSVYSKDNPNLLFNMCG
FECRILPKCRTQTEEFTHRDGVWNLQNEVTKERTAQCFLRVDDESLGRFHNRVRQILMAS
GSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRF
PPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRY
IQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLA
YDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFK
GTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGF
QVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQK
ETIHPRKSYKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDY
DSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGCKTLIQQAMA
KIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIH
KTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRS
LPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATE
PQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTL
TDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEK
QTKEQNQLTATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIY
VSSDDIKETGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQW
GTHQTINLPNALPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENTTWDGEKT
IVITCSFTPGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFF
MVPAQGSWNYNFMGVRHDANMKYELQLSNPKEFYHEIHRPSHFLLFSNLEDAGDGSGADR
EDVYA
NT seq
7218 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgccgccatacatgataccgccgaatgcctgggcggcacaaatcatggcgcaa
cagcaggctcaggcatatgcagccgccgctcaagtacagcaggcacaaatgcatgcacat
caaatggctaatcaaatacaacaaatccctccaccgggagcaccattaccagggccgata
acaaatggcaatgtgggtatgccacctggtggtatagggggtggtggtggtataagtcaa
gcacagctcggacaaataccaacacccaaaccggacatcattactgaagagaaactgcaa
gaaaaagcacaaaagtggcaacaactgcaatcgaagcgatttgcagagaaacgaaaattc
ggttttgtagatgcccaaaaggaagacatgccgccagagcatattcgcaaaattatacgc
gatcacggtgacatgacatcacggaagtatcgccatgataagcgagtttacttaggagca
ttaaaatatatgcctcatgctgtgttaaaattacttgaaaacatgccaatgccctgggag
cagatacgagatgtgcaggtgttgtatcacattacaggtgccatcacattcgtcaatgaa
ataccatgggttattgagccagtttatattgcgcaatggggtaccatgtggattatgatg
cgtcgcgaaaagcgtgaccgacgccactttaagcgcatgcgatttccacctttcgatgat
gaggaaccgccgctagactatgcagacaacgttttggatgttgagccattagaagccata
caaattgatttagaccacgaagaagatggcgccgtttataaatggttctacgagcatagg
ccattagttggaacaccttacgtgaatggttccacataccgtaaatggaacttgacttta
ccacaattggctacgttatatcgtttggccaatcagttgctaacagatttggtagacgac
aattttttctatcttttcgatccgaaaagtttctttacggctaaagcactgaatatggct
ataccaggtggtccgaaatttgagcctctcattaaggaccataatgttggtgatgaagat
tggaatgagttcaatgacattaataaagttatcatacgccagccaattcgaaccgaatat
cgtatcgcttttccttacctttacaacaatatgccgcatttcgtgcacctttcctggtat
cacacgcccaatgttgtgtatattaaaactgaagatccagatttgccagccttttacttt
gatccactgattaatcctatttcgcatcgtcatgctcataccaagatagcagagcccatg
ccagacgatgatgaggacttctcattgcccgatgaagtacaacccttcttgcaggacaca
ccgctttacactgataacacagctaatggcatagcactgttatgggcaccacggcctttc
aatctacgttcgggtcgttcacgacgcgccatagatgtgccactcgtgaaaagttggtat
aaagagcactgcccacctggtcatcccgttaaagtgcgtgtgagttatcagaagttgttg
aaatattatgtgttgaatgcactcaaacatcgcaaacctaaaccgcaaaaaaagaggtat
ctatttcgttcatttaaagcaacgaaatttttccaaaccaccactttagactgggtagaa
gctggcttgcaagtttgtcgacagggctacaatatgctgaatttattgatacatcgcaaa
aatctgaattatctgcatttggattataatttcaatttgaagcctgtaaagacattgacc
acgaaggagcgtaaaaagtcgcgttttggcaatgcattccacttgtgccgtgaaattctg
cgtctaactaagctgatcatcgactcacacgtgcaatatcgtcttaacaacgtggacgca
tttcagctggccgatggattacagtacatttttgcacatgttggccagttaactggcatg
taccgttacaagtacaagttaatgcgacagatacgtatgtgcaaagacttgaagcatctc
atctactatcgctttaacaccggtccggtgggcaaaggtccgggatgtggtttctgggca
ccaggttggcgtgtttggttgttctttatgcgtggcataactccattgctagaacgctgg
ctgggcaatttgctgtctcgtcaatttgagggtcgtcactcgaagggcgttgcgaaaact
gtaaccaaacaacgtgtagaatcacatttcgatttggagttgcgtgcttcggtcatgcac
gacatagttgatatgatgcccgaaggtattaagcaaaacaaggcgcgcaccatattgcag
cacttgtcagaagcgtggcgttgttggaaggcgaatataccatggaaagtgcctggattg
ccgatacccatagagaatatgatactacgttatgtgaaaatgaaggctgactggtggact
aacacagcgcactacaatcgtgaacgtatacgtcgtggtgctacagtggacaaaactgtg
tgtaagaaaaatttaggtcgtctaacgcgtctctatctgaaagcagaacaggagcgccaa
cataattatctaaaagatggtccgtacatatcacccgaagaggctgtagccatttatacc
acaacagtgcattggttggagtcacggcgcttcggtcccatacctttcccaccgctttcc
tataaacacgacaccaaactactgatattggcgttggagcgtctgaaggaagcctacagc
gttaagtcgcgcttgaatcagagtcaacgcgaggagttggggctcatcgaacaagcctac
gataatccacatgaggcattgtcgcgtataaaacgtcatttgctgacacagcgtgcgttc
aaggaggttggtattgaatttatggacttgtacagtcatttgatacctgtttacgatgtt
gaaccgctagagaaaataaccgatgcctatttggatcaatatttgtggtatgaagcagac
aagcgtcgcctatttccgccatggatcaaaccaagtgatactgagccaccgccattattg
gcgtataagtggtgtcaaggcatcaacaatctgcaggacgtttgggatgtgggcgagggt
gaatgcaatgtgctgctggaatcgcgttttgaaaaactctatgagaaaatcgatttgacg
cttttgaatcgtttgctgcgtctcattgttgatcataatattgccgattacatgacagcc
aaaaacaacgtcgtcatcaactataaggacatgaatcacaccaacagttatggcatcata
cgcggtctccagttctcttcgttcataacgcaatactacggattggttttggatctattg
gtgcttggcctgcatcgcgccagcgagatggccgggccaccgcaaatgccaaatgatttt
ctgacgttccaagacactgtcaccgagagtgcacatccaatacgtttatattgtcgttat
gtggatcgcattcatttgttcttccgcttttcggccgaagaggcgcgcgatttgattcag
cgctaccttaccgaacatccagatccaaataatgagaatattgttggttacaataacaaa
aagtgctggcccagagatgcgcgcatgcgtctgatgaagcacgatgttaacctgggtcgc
gctgttttctgggacattaagaatcgcttgccacgctccgtgacgacaatcaattgggag
aacacctttgtttcggtgtactcgaaagataatccaaatcttttgtttaatatgtgtggc
tttgagtgtcgtattctgccaaagtgtcgcacacaaactgaggagttcacacatcgagat
ggtgtttggaatttgcaaaatgaggtgaccaaagagcgcacagctcaatgtttcctacgt
gttgacgacgagtcgctcggccgtttccataatcgtgtgcgccagattctaatggcctct
ggttcaacgacgtttacaaagattgttaataaatggaatactgcacttattggccttatg
acatatttccgcgaggcggtcgtaaatacacaggaactgctcgatttgctggtgaagtgt
gaaaacaaaatacagactcgtattaaaattggtctcaactcgaaaatgccttctcgtttt
ccaccagtggtgttttatacgcccaaagaattgggtggcttgggcatgttgagcatgggt
cacgtgcttataccgcaatcggatttgcgttggtccaagcaaactgatgtgggcataaca
catttccgctcaggtatgtcacatgatgaggatcaattaattcccaatttgtatcgctac
attcaaccatgggagagtgaattcattgactcgcaacgtgtatgggctgagtatgcactg
aaacgtcaagaggctaatgcgcagaatcgtcgtcttactttggaagatctcgaggatagt
tgggatcgtggtataccacgtataaacacactcttccaaaaggatcgtcacacacttgcc
tatgataagggttggcgcatacgtacggaatttaaacaatatcaagtgttgaaacaaaac
cccttctggtggacgcatcaacgtcacgatggcaaattatggaacctcaataactaccgt
acggatatgatacaggctttgggcggtgttgaaggtattctagagcatacactctttaag
ggcacatacttccccacgtgggaaggtcttttctgggagaaagcgtctggttttgaagag
tcaatgaagtacaaaaagttgacaaatgctcaacgttccggtttaaatcagattcccaat
cgtcgttttacgctttggtggtcaccaactattaatcgtgccaatgtgtatgttggtttc
caggtgcaactcgatttgacaggtattttcatgcacggcaaaatacccactttgaaaatt
tcgttgattcaaatcttccgtgctcacttgtggcaaaaaattcacgaatcgattgttatg
gatttgtgtcaggtgttcgatcaggaattggacgcactcgaaattgagactgtacaaaaa
gaaactatacatccgcgtaaatcttataaaatgaactcgtcttgtgctgatattttgtta
ttccctgcctataagtggaatgtatcgcgtccatctttgcttgcggacacaaaagacaca
atggacaatacaacaacacaaaagtattggttggatatacagttgcgttggggtgattac
gattcacatgatgtggaacgttatgcgcgcgcgaaattcctcgactacaccacagataat
atgtccatctatccctcgccgactggtgtgctcatcgctattgatttggcctataacttg
cactcggcttatggtaattggttcccgggctgcaagacactcatacaacaagctatggct
aagataatgaaggccaatcccgcgttgtacgtattacgtgaacgtatacgcaaagcgttg
caactgtactcatccgagccgactgaaccttatttgagctcacaaaattacggtgaattg
ttttcgaatcaaattatttggtttgtggacgacacgaacgtgtatcgtgtcaccatacac
aaaacattcgaaggcaatctaacaacgaaacccattaacggtgcaattttcattttcaat
ccacgtactggccaactgttcttgaaaatcattcatacgtcggtgtgggctggtcaaaaa
cgtttgggtcagctggccaaatggaagacagccgaagaagtggcggctttgattcgttcg
ttgccagtagaagaacagcccaaacagattatcgtgacacgtaagggtatgttggatcca
ttggaagtgcatttgctagattttccgaatattgtgatcaaaggctctgagttgcagcta
ccattccaggcttgccttaaggttgagaaattcggtgatttaattttgaaagccactgaa
ccgcagatggtgctcttcaatctctacgatgattggctgaagaccatctcgtcatacaca
gcattcagccgtttgattttgattttacgtgcactccatgtgaataccgaacgtacaaag
atcatattgaagccggataagacaacaataacggaggcacatcacatctggccaactctc
accgacgaggagtggattaaggttgaagtgcaacttaaggatctaattctggccgattat
ggtaaaaagaacaacgtgaatgtggcctcgttaacgcagtctgaaattcgtgacattatt
ttgggcatggaaattagtgcaccatctgcgcaacgtcaacaaattgccgaaattgaaaaa
cagaccaaggaacaaaatcaattgacggccacaacaacacgtacaaccaacaagcatggc
gatgaaattattacctcaaccacatcgaactacgagacgcaaacgtttagttcgaaaaca
gagtggcgcgtacgtgccatatcagcgacaaatttgcatctgcgtacgaatcatatttac
gttagttcggacgatatcaaagagactggttacacctatatattacccaagaacatactg
aagaaatttgtgacaatttccgatttgcgcgcgcaaattgctggctacctgtatggcgtg
agtccgcccgacaacccgcaggtaaaagaaatacgctgcattgttatgccaccacaatgg
ggcacacatcagacgataaacctgcccaatgcgctgccaacgcatcagtatctgaaggat
atggaaccgctcggctggatacatacacagcccaacgagttgccgcaactatcgccgcaa
gatatcaccacacacgcaaagattatgcaagagaatacaacgtgggatggtgagaagacc
atagttattacctgctctttcacgcccggctcatgttcgttgaccgcctataagctaaca
ccatccggttttgagtggggttccaaaaatacagataaaggcaataatcccaagggttac
ttaccgtcccactatgagcgcgttcagatgttgctgtccaacaaattcctcggcttcttc
atggtaccagcgcagggtagttggaattataactttatgggtgtgcgccacgatgcgaac
atgaaatatgagctacaattgtcgaaccctaaagaattctaccacgaaatacatcgaccc
tcacactttttattattctctaatttagaggatgcaggcgacggttcaggtgcagatcgc
gaggatgtgtatgcgtag
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integrated database retrieval system
