Anastrepha obliqua (West Indian fruit fly): 129243572
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Entry
129243572 CDS
T09777
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
aoq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129243572
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129243572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129243572
04121 Ubiquitin system [BR:
aoq04121
]
129243572
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129243572
Enzymes [BR:
aoq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129243572
Spliceosome [BR:
aoq03041
]
Complex B
Other components
Prp19 complex
129243572
Complex C
Prp19-CDC5 complex
129243572
Ubiquitin system [BR:
aoq04121
]
Ubiquitin ligases (E3)
U-box type E3
129243572
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
129243572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Prp19
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT122_1st
U-box
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD40_like
Beta-prop_WDR35_TULP_N
Cytochrom_D1
zf-Nse
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
129243572
NCBI-ProteinID:
XP_054736664
LinkDB
All DBs
Position
4:complement(68712074..68717719)
Genome browser
AA seq
507 aa
AA seq
DB search
MSLVCAITNEVPDTPVISPHSGAIFEKRIIEKYILENGCDPITGKELKVEDLIEVKTPPI
VKPKPPSATSIPATLKTMQDEWDALMLHSFTQRQQLQTARQELSHALYQHDAACRVISRL
NKEVAAAREALATLKPQAGIGASTAPTSIPQPAIAAEAAGNATHPIEQTGMSAEVIQKLQ
DKATVLTQERKKRGRTVPEELVTQEQIKSFMTVASHPGLHSASIPGILALDINSADHSKI
LTGGNDKNATVFNKDTEQVVAILKGHTKKITKVIYHPDEDTVITGSPDMSIRIWHVPTSQ
TQLLLRCHDGPVTGLSLHPTGDYILSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQF
HPDGLIFGTGTDDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKL
WDLRKLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGTDVRIHLCKQWQDLKVFNDHTALA
TGVRFGKHAQYLASTSMDRTLKLYAIE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggtctgtgcaattacaaatgaagtgccagacacacccgtaatctcaccacat
tctggtgcaatattcgaaaagcgcatcattgagaaatatatactggaaaatggttgtgac
ccaatcaccggtaaagagctgaaggttgaagacttgattgaagtaaaaacaccgccaata
gtaaaaccgaagcctccaagtgctaccagtatcccagccacattgaagacaatgcaagat
gagtgggacgcattaatgttgcactcatttacacaacgccaacaactgcagacagcgcgg
caagagttatcgcatgccttgtatcaacatgatgcggcatgtcgtgtaatatcgcgttta
aataaagaagtggctgcagcacgtgaagccttggcgacactcaaaccgcaagccggtatt
ggcgcctctactgcacctacgtcaatacctcaaccagcaattgctgctgaagctgccggc
aatgccacacatccgattgaacagactggcatgagtgccgaagttatacaaaagcttcaa
gacaaagctactgtactaacacaggaacgtaagaagcgtggccgaactgtgcccgaggag
ttagttacacaggagcaaattaaatcattcatgactgtggcttcacatcctggcttacat
tcggcctccataccaggcattttagcgttggatattaatagtgctgatcatagtaaaatt
ttgactggtggaaatgataaaaatgcaacagtatttaataaagatacggaacaagttgta
gctatactgaaaggacacactaagaagataaccaaagtgatctatcatccggatgaggat
accgtaattacaggttcgcctgatatgtctatacgtatttggcatgtccctacatcacaa
acgcagttgcttttacgttgtcatgatggacctgttacgggtttgtcactgcatcccacg
ggcgattacatattatctacatcatcggacaaacattgggctttttcagatatacgcact
ggacgtttattgacaaaggtaattgacaccgccgaggtcggtttaacaacagcacaattc
catcctgatggtttaattttcggcaccgggactgatgattcacaagtgaagatttgggat
ttgaaagaacaaagtaatgtagccaatttccctggacatactggtccaatatcagcaatt
agtttttcggaaaatggttattacttggccactgcggcggatgatgcatgcgtaaaattg
tgggatttgcgcaaattaaagaactttaagacaatacaattagatgatggatacgaagtc
aaagacctgtgctttgaccagagtggtacctatttggccatagcgggtactgatgtgagg
attcatctatgtaaacaatggcaggatttgaaagtcttcaacgaccacacggctttagcc
acgggtgtgcgattcggcaaacatgcacaatatttggcctcgacaagcatggatcgtaca
ctaaaactttatgccattgaataa
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