Anastrepha obliqua (West Indian fruit fly): 129244276
Help
Entry
129244276 CDS
T09777
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq04150
mTOR signaling pathway
aoq04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129244276
04150 mTOR signaling pathway
129244276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoq04131
]
129244276
Membrane trafficking [BR:
aoq04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
129244276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
DUF5050
EGF_LRP2
Vgb_lyase
TMEM154
Motif
Other DBs
NCBI-GeneID:
129244276
NCBI-ProteinID:
XP_054737867
LinkDB
All DBs
Position
4:complement(91789581..91797079)
Genome browser
AA seq
1659 aa
AA seq
DB search
MGDPYGVPKHSIGTSQPFAAARKPNHHRQAHISPALSTAASTATSSFSSSSILPISASAS
PFIPTTLLFTTYHDIQVANITRPTGSPQIDVIVKDLTETMAIDFYYARNLICWADCGREL
IECVNINSSMPLMKAPKQTVISAGLDKPEGLAIDWYTEKLYWTDGEKNRIEVATLNGKYQ
KVLFWTDLDQPRAIAVVPSKRLLIWTDWGEYPKIERASMDGDPLTRMTIVKDNIFWPNGL
TVDLKNELIYWADGHLKFIDVMKLDGSNRRTVVGTLEYPYSVTYFNNRLFWTDWSKGGSL
NTFDLKSHELRELIDTPEAPISVRTWDPSLQPFEDNPCLHNNGNCSHLCLLSTNAQGYSC
ACPTGVKLVSETNCANGSREMLFIVQRGQISKISLDTPDFTIFPLPLGKVKYAIAIDYDP
VEEYIYWSDVEAYTIRRAHPDGTAMQDFVTSEVRHPDGLAVDWLARNLYWTDTITDRVEV
CRLDGTARKVLIYEDLEEPRAIALAPSLGWMFWSDWNEKKPKVERASLDGSERVVLVSED
LGWPNGIALDIEAKTIYWCDGKTDKIEVANMDGSDRRVVISDNLKHLFGLSLLDDYLYWT
DWQRRAIDRAHKITGNNRIVVVDQYPDLMGLKVTRLRDVKGSNSCAVRNGGCTQLCLNRP
SDYVCRCSIEYELANDKKTCVIPEAFLLFSRQEHIGRISIDNNEGNHNDEKIPFKDVRDA
HALDVDVADKRIYWTDQKSKCIYRAFLNGSFVQRIIDAGLICPEGIAVDWLAHNIYWTDS
EARRIEVARLDGTSRRVLLWKGVEEPRSLVLEPKRGYMYWIESPSDSIRRAGMDGSELQT
IISGANHATGLTLDPETRRLYWATQSRPTKIESADWDGKKRQVLINTDVDEPYAMSLYQD
FVYWSDWNTGDIERVHKMTGQNRSLVHSGMTYIRSLLIFYQNRQTGSNPCKINNGGCSHL
CLAQPTRRGMICACPTHYTLSKDNMSCLPPKNYIIYSQRNSFGRLLPNTSDCPNVPLPLS
GKNIRAVEYDPISHNIYWVEGRSHSIKHSPANSTFVKVLVGSGSQPFDIALDVIGRLLFW
TCSHSNSINVTRFDGDSIGVIDTGDSEKPRNIAVHAMKRLLFWTDVGSQQAIIRSRIDGA
ERVVLAFKLEGVTALAVDQQSDMVYYAHGKRIDSMDINGKNKKILVSTHISQVISLAAIQ
GFVYWLDDKTGVERITVNGDGRRPEMQRLPQITDIVAVWTPESKLFRNHTCLHSRTICSH
ICIASSEGRVRDICSCPKNLMLLEDRQNCGALPACGPDHFTCAAPVKGDGSSSDINKDCI
PASWRCDGQSDCPDKSDEVGCPSCRPDQFSCQSGECIDKALVCDGTTNCANGHDEADCCK
RPGEFQCPINKLCISATLLCDGWDHCADGADESAEMCSQANTRRMAPASDKKAFMILIFA
TIVIIFSIVYLLQVCRTRIGKSRNEPKDDQASDPLSPSTLSKSQRVSKIASVADAMRMST
LNSRNSINSYDRNHITGASSSTTNGSSMGAYPINPPPSPATRSRRPYRHYRIINQPPPPT
PCSTDICDESDSNYTSKSNSNNSNGATKISSSSAVICMQYQYDSEPYPPPPTPRSHYHSD
VRIVPESSCPPSPSSRSSTYFSPLPPPPSPVQSPSRGFT
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacccttatggagtacctaagcactccattggcacatcccagcctttcgcagct
gcacgcaagcccaaccaccaccgtcaggcacacatatcgcccgcattgtctaccgctgcc
tcaaccgccacctcctccttttcatcgtcttccatcttgcccatcagcgcaagcgcttca
ccatttatacctacaacactactcttcactacatatcatgacatacaagtcgcgaatatc
acacgtccgactggtagtccgcaaatcgatgtcatcgtcaaagatcttaccgaaacgatg
gccattgatttctattatgcgcgtaatctaatttgctgggccgactgtggtcgagaactc
atcgaatgtgtgaacattaatagttcgatgccattaatgaaagcacccaaacaaactgtg
atatctgcgggtctcgataagcccgaaggactcgccatcgattggtatacggaaaagcta
tattggacggatggcgagaaaaaccgtatcgaagtggcgacgcttaatggcaaatatcag
aaggtgctcttctggacggatttggatcaaccgcgcgctattgcggtggtaccttcgaag
cgtctactcatttggaccgattggggtgaatatccgaaaattgaacgtgccagtatggat
ggtgatccgttgacacgtatgactattgtgaaagataacattttctggcccaatggcttg
acggtggacttaaagaatgagctcatctattgggcggacggtcatttgaagtttatcgat
gtgatgaaattggatggcagcaatcggcgcacagtggttggcactttggaatatccctat
agtgtgacgtatttcaacaaccgtctcttttggaccgactggtcgaagggcggttcatta
aatacattcgatctgaagtcacatgagttgcgtgagttaatcgatacgccggaggctccg
atttccgtgcgcacttgggacccttcactacaaccgttcgaggacaatccatgcctgcat
aacaatggtaactgttcgcacctttgtttgctttctacaaatgcacagggctatagctgt
gcctgtccgacgggcgtgaaactggtatcggaaacaaattgcgcgaatggctcacgggaa
atgctcttcatcgtacagcgcggtcagattagcaaaatttctttggacacaccagacttc
acgatatttccattgccgctgggcaaagtaaagtatgcaattgcgatcgactatgatcct
gtggaggagtatatctactggtctgatgtggaggcctatacaatacgacgtgcgcatcca
gatggtacagccatgcaagactttgttacgtctgaagtgcggcatcctgacggactggca
gttgattggctagcgcgaaacctctattggaccgacacaataactgatcgagtggaggta
tgtcgtttggatggtacggcgcgcaaagtgttgatctacgaagatctggaagagccacga
gccattgcgctggcaccttcacttggatggatgttttggagtgactggaatgaaaagaaa
ccaaaagtggagcgcgcttctttggacggttcggagcgtgtggtgcttgtctccgaagat
cttggttggccaaatggtattgctttggatattgaagcgaaaacaatttactggtgcgat
ggtaaaacggacaagatagaggtggccaatatggatggctcggatagacgtgttgttata
agcgataacctgaaacatttattcggtttgagtttactagatgactacctctattggact
gattggcagcgacgcgccatcgatcgcgcgcacaaaatcactggcaacaatcgaatagtc
gtcgttgatcaataccccgatctgatgggtctgaaagtgacgcggttacgcgacgttaag
ggttcgaattcatgcgcggtacgcaacggcggttgcacgcaactttgtctcaatcggcca
agcgactatgtctgtcgatgttccatagagtacgagctggcgaatgacaagaaaacatgc
gtcatacccgaagcatttttgctgttttcgcggcaggaacacatcggacgaatttcgatt
gacaacaacgaaggtaatcataatgatgagaagattccttttaaagatgtgcgcgatgca
catgcgctggatgtggatgtggcagacaaacgcatctactggactgatcagaagtcgaaa
tgtatttaccgcgcctttttgaatggttccttcgtgcagcgcatcatcgatgccggactc
atttgtcccgaaggtatagcagttgattggttggcgcacaatatttactggaccgactct
gaagcgcgacgcattgaagttgcacgtttggatggcaccagtcgacgcgtgctgctctgg
aaaggcgtagaggagccgcgttctttagtattagagcccaaacgtggctatatgtactgg
atcgagtcgccttcggattcgataagacgtgccggcatggatgggtccgaattgcagaca
ataatttcgggtgcgaatcatgcgactggacttacgttagatccagaaacgcggcgtctc
tactgggcaacacaatcgcgacccacaaaaatcgaatctgccgattgggatggcaagaaa
cgccaggtgctgatcaacaccgatgtcgacgagccctatgcaatgtcgctctatcaggat
tttgtctactggagcgattggaatacgggtgacattgaacgagtgcacaagatgaccgga
cagaatcgcagtcttgtgcacagcggcatgacttacatacgttcgttgctgatattctac
caaaatcgtcagacaggcagtaatccatgtaaaatcaacaatggtggctgttcccatttg
tgtttggcacaaccgacgcgtcgcggtatgatttgcgcctgtccaacgcactacactttg
tccaaggataacatgtcctgtctaccacccaagaactatatcatctacagccagcgtaat
agctttggtcgtttactgccgaacacgagcgactgcccgaatgtgccattgccgctatcg
ggcaagaatatacgagcggtggaatacgacccgatttcacataacatttactgggtggaa
ggacgtagccacagcatcaagcactcacccgcgaacagcacttttgtgaaggttttggta
ggctcgggttcgcagcccttcgatattgcattggatgtgattggtcgtctactgttctgg
acctgttcacattcgaacagcatcaatgtgacgagattcgacggtgattccataggtgtc
atagatacaggcgactcggagaaaccgcgcaacattgccgtgcacgccatgaagcgtctg
ttgttttggaccgatgtgggtagtcagcaagccatcatacgttcgcgcatcgacggcgct
gagcgtgtagtgcttgcttttaagctggaaggagtcacagcgcttgcagtggatcaacaa
agtgacatggtttactatgcgcatggcaagcgcattgattcgatggacataaatggcaaa
aataagaaaattctcgtttccacgcacatttcgcaagtcatctcgctcgccgcaattcaa
ggtttcgtctattggctggacgataaaactggtgtggagcgcataaccgtaaacggtgat
ggtcgtcgccctgaaatgcaacgcctaccacaaataactgacattgtggccgtttggacg
cccgagtcgaaactatttcgcaatcatacttgtctacacagtcgcaccatatgctcgcat
atttgtattgcttcatcggagggacgcgtacgtgatatctgctcttgtccgaagaatctt
atgttgcttgaggacagacagaattgtggcgccttacctgcttgcgggccggatcatttc
acttgtgcggcgcctgttaagggcgatggctctagcagtgatatcaataaagattgtata
ccagcatcatggcgttgcgatggccagagtgattgtcccgataaatcggatgaagtgggc
tgtccctcatgtcgacccgatcagtttagctgtcagtcgggcgaatgcatcgataaggcg
ctggtgtgtgacggcactacgaattgtgcaaatggtcatgatgaggcggactgctgcaag
cggccgggcgagtttcagtgtcccatcaataagctctgcatctcggccacactactgtgc
gacggttgggatcactgcgccgatggtgctgacgaatcggccgaaatgtgctcacaagcg
aatacccgtcgcatggcgcccgcctcggataagaaggccttcatgattctcatctttgcc
accatcgtcattatcttctccattgtctatctgctacaggtctgtcgcacacgtatcggc
aaaagtcgcaacgaacccaaagacgatcaggcatctgatcccctttcgccgtcgacactc
tctaaatcacagcgtgtttcgaaaatcgcctcagttgccgatgcgatgcgcatgtccaca
ttgaattcgcgcaacagcatcaattcttatgatcgcaatcacatcactggcgcctccagt
tccaccacgaatggcagcagcatgggcgcctaccccatcaatccgccaccctcgcctgcg
acgcgctcgcggcgtccctatcgtcattatcgcatcattaatcaaccaccgccgccgacg
ccctgttcgacggacatttgcgatgagtccgattcgaattataccagcaaatcgaacagc
aataacagcaatggcgccaccaaaatttcctcatcgtcagcggtgatttgcatgcaatat
caatatgatagtgaaccatatccaccaccgccaacgccacgctcgcactaccacagcgat
gtgcgaatagtgccggaatcgtcgtgtccgccatcaccatcatcgcgttcatcgacgtat
ttctcaccgctgccgccgccaccatcgcctgtgcaatcacccagtcgtggtttcacgtaa
DBGET
integrated database retrieval system
