Anastrepha obliqua (West Indian fruit fly): 129244794
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Entry
129244794 CDS
T09777
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03022
Basal transcription factors
aoq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129244794
09124 Replication and repair
03420 Nucleotide excision repair
129244794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129244794
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129244794
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129244794
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129244794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
129244794
NCBI-ProteinID:
XP_054738613
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Position
4:33634664..33638141
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AA seq
599 aa
AA seq
DB search
MTTSSEDVLLQMGEVRYKKGDGTLYVMNERLAWMAENRDTVAVSHRFADIKMQKISPEGK
PKVQLQVVLHDGNSSTFHFVNRNGQQAMLADRDKVKELLQQLLPNFKRKVDKELEEKNRI
LSENPNLLQLYKDLVITQVLTSEEFWATHAKEHAMKKINKKQDIGVSGAFLADIKPQTDG
CNGLKYNLTPDIILCIFKTYPAVKRKHQENVPAKLTESEFWTKFFQSHYFHRDRITAGSK
DIFTECGKIDDQTLKAAVQQGAGDPLLDLKQFEDVPLEEGFCSVAGDRNISNSGNIVHQN
MIKRFNQHSIMVLKTCADVAGSSTSTANGPAKMKDPKANEHSAVNGGAEKSKHAKDGKSN
SGDANSTNNATLNGIAASPDRPAKRQRIIEKIHYEDLGDPLIEAADEADASKKFKKPQQL
SLAKEERYLHGPLPITGYDMHEDPRRMEEVQYHLMRATETWTQRTPHKVLVSPTAAVNAL
GELSPGGALMRGFHEQSVGQLVPKDFEKDLRNLYLSLSELLKHFWNCFPPTTAEAEEKAV
RMHEAVQRFKMAKLVPFESRALHELSPLGASLTQHLNRLLQSANTKFATWQERKMRQHR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccagcagtgaggatgtgttgctgcaaatgggtgaggtgcgctacaaaaagggc
gatggcactctatacgtaatgaatgagcgccttgcatggatggcggaaaatcgcgatact
gttgcagtatcgcatcgctttgccgacattaaaatgcagaaaatatcgcctgagggcaag
ccgaaggtgcagcttcaagttgtgttgcatgacggtaatagttccacattccattttgtc
aatcgtaatggacagcaagcgatgctggcagaccgtgataaggtgaaggagttattgcag
caactactgccgaattttaagcgcaaagtcgataaagagttggaggagaaaaatcgtata
ctttccgaaaatcctaatctcttgcagctttataaggatttggttataacgcaagtgctc
actagtgaagagttctgggctacacacgccaaggagcatgccatgaagaaaatcaacaaa
aaacaagacattggtgtgtctggcgcctttcttgccgatataaaaccacaaaccgatggt
tgtaatgggttgaagtacaatttaactcccgacataattctgtgtatttttaaaacttat
cccgccgtaaaacgaaagcatcaagaaaatgtgcctgccaagttgacagagtcggaattc
tggacaaagttttttcagtcgcactactttcatcgtgatcgcataacagctggctctaaa
gatatatttacagaatgtggcaaaattgacgatcaaacattgaaagctgccgttcagcag
ggtgcaggcgatcccttactcgatctgaagcaatttgaggacgtgccactggaggagggt
ttctgtagcgttgctggggaccgcaatatctcaaatagtgggaacatagtgcatcagaat
atgatcaagcgtttcaatcagcactcaataatggtgctaaagacttgcgccgatgtcgct
ggcagctctacttcaactgccaatggaccggctaaaatgaaggacccgaaagccaatgaa
cactcggccgtaaatggtggtgctgaaaaatcaaaacatgcaaaagacggtaaatcgaat
agtggcgatgcaaattcaacgaataatgccacgctcaacggaattgctgctagtcccgat
aggccggccaaacgccaacggataatcgaaaaaatacactatgaagatcttggtgatccc
ttaatagaagcagctgacgaggctgatgctagcaaaaaatttaagaagccacaacaatta
tcactagccaaagaggaacgctatttacacggccctttgccaatcactggctacgacatg
cacgaagacccacgccgcatggaagaagttcagtaccatctaatgcgtgccacggaaact
tggacgcagcgcacaccgcacaaagttttggtcagtccaacggcagcggtcaatgcgctc
ggcgaattgagtccgggtggtgcgcttatgcgtggcttccatgagcaatcggtcggccag
ctggtgccgaaagactttgaaaaggatttgcgtaatttatatttgtcattgtcagaattg
ctgaaacatttctggaattgtttcccaccaaccaccgccgaagccgaagaaaaggccgtg
cgcatgcacgaggcggtgcaacgcttcaagatggctaaacttgtgccgttcgagagccgc
gccttgcatgaattgtcgccactgggcgcttctctaacgcagcatttgaatcgtttgttg
cagtcggcaaacacaaaattcgccacttggcaggagcgcaaaatgcgccagcataggtag
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