Anastrepha obliqua (West Indian fruit fly): 129245022
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Entry
129245022 CDS
T09777
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129245022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoq03009
]
129245022
Ribosome biogenesis [BR:
aoq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129245022
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_IFT122_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_2nd
Beta-prop_RIG_2nd
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
129245022
NCBI-ProteinID:
XP_054738946
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Position
4:42810280..42812075
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AA seq
511 aa
AA seq
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MSDSENESIKDLLECAEEYENLMQEKLKASGKRDDRASAAVAVKNKEHKSNNDIQEIPME
KVIFGDKKNLLKNFAAAVGEAKNLKQIKEEVSGGENDDRNETKKRKPAWTDADDTDITIG
DVKRRTRFSGPQDHLRKDKSYTEYLTSRYVRTVAQPNWASLDHKKEFGDSGEEALLQTVG
FVAKPDRSTLLPTHLKFKGLKDLNRATYAEGAITSIQFIPKSTATLVAGLKGIATIYSID
GYQNEKLHSIRFKKFPIMCARLKPCGTKAIFGSSRRKYFVYDLLTAQETSYNLPNDITIM
RNFRVSSCGRYMAVAGRFGNLHLFDAASQELIHSFKQEEDVASICFTADSKSIICSSLSS
KINIFSLPMQRLAHSFIDDGCLNGSAMDLSVDQRLLATGSMEGVVNVYDFQKVQTSATPQ
PTKTFLNLRTSISDVKFNNTAEILAMSSAEVPSAVKLAHFPSATVFSNFPSEKIKIGETR
VVEFSPNSGYLALGSTRKEVNFLRLKHYKYY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacagtgaaaacgaaagcattaaggatctgctcgaatgtgctgaagagtatgaa
aatttgatgcaggaaaaattgaaagctagtggcaaaagggatgatagggcatcagctgca
gttgctgtgaaaaacaaggaacataaaagcaacaatgatattcaggagatacccatggaa
aaagttatatttggtgataagaagaatttgttaaaaaattttgcggctgccgtaggtgaa
gccaaaaacctaaaacagatcaaagaagaggtgagcggtggcgagaacgacgaccgcaat
gagacaaagaagcgtaagcccgcctggacggacgcagatgatacagatattactataggc
gatgtaaaacggcgaacgcggttctctggaccacaagaccatttgcgaaaggacaaatct
tacacggagtatctcacatcacgatatgtgcgcacagtagcccaacctaattgggcgtca
ctagatcacaagaaagaatttggtgattctggagaagaagcacttctacaaactgtaggt
tttgtagcaaagccagatagaagtactttgttgccaactcatttaaaattcaaaggattg
aaagatttaaaccgtgccacttatgcagaaggagctataactagcatacaatttatacct
aaaagcacagcaactcttgtagctggactgaagggcatagccactatttatagcattgac
ggttaccagaatgaaaaattgcatagcatccgctttaaaaaattccccatcatgtgtgct
cgtttgaaaccatgtggtacaaaggctatttttggttcctcaagacggaaatacttcgtt
tacgatctgctgacggcgcaggaaacgagctataacctgccaaatgatatcactataatg
cgcaacttcagagtgtcttcatgtggacgctacatggccgtcgctggtcgtttcggcaac
ttgcatctatttgatgccgcctctcaagagcttatacactcattcaaacaggaggaggat
gtagcgtccatatgctttactgcagactccaaaagcatcatatgcagctcgctgtcttct
aagattaacattttttctttaccaatgcagcgtttggcgcatagttttattgatgatgga
tgcttgaatggcagtgcaatggatctatcagtagatcaacgcctcctcgcaactggtagt
atggaaggtgtggttaacgtttacgacttccaaaaagtgcaaacatcagctacgccgcag
ccaacaaagacgttcctgaacttgcgaactagcatttctgatgtaaaattcaacaacact
gccgaaattttggccatgagttcagctgaagtaccttctgccgtaaagttggcacatttc
ccaagcgcaacagttttctccaatttcccgtcagagaaaatcaaaattggtgaaacccgc
gttgtcgaattttctcccaacagcggatatttagctttgggcagcactcggaaagaagtg
aattttttgcggcttaaacattataaatattactaa
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