Anastrepha obliqua (West Indian fruit fly): 129245094
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Entry
129245094 CDS
T09777
Name
(RefSeq) ATP-dependent RNA helicase DHX15 homolog isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129245094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129245094
03009 Ribosome biogenesis [BR:
aoq03009
]
129245094
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129245094
Spliceosome [BR:
aoq03041
]
Complex A
U2 snRNP components
U2 related factors
129245094
Complex B
129245094
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129245094
Ribosome biogenesis [BR:
aoq03009
]
Eukaryotic type
90S particles
Helicases
129245094
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
ResIII
Flavi_DEAD
ABC_tran
AAA_25
AAA_30
ATPase
AAA_7
T2SSE
PhoH
HTH_IclR
TsaE
Motif
Other DBs
NCBI-GeneID:
129245094
NCBI-ProteinID:
XP_054739051
LinkDB
All DBs
Position
4:115825811..115832126
Genome browser
AA seq
737 aa
AA seq
DB search
MSKRRIEVGETYNTKSKNLNPLSNSREFDVSATSFNNTAAAAPVAGAVASASRQPGNVNP
YNLKPFTQRYFNLYKKRITLPVFEYQADFMRLLNEHQSIVLVGETGSGKTTQIPQWCVEF
ATSKGKKGVACTQPRRVAAMSVAQRVSEEMDVSLGEEVGYSIRFEDCSSAKTVLKYMTDG
MLLREAMSDPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGK
FQQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDIEGDILMFLTGQ
EEIEEACKRIKRETDNLGSDIGELKCIPLYSTLPPNLQQRIFEPAPPRNANGAIGRKVVV
STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLISAISKASAQQRAGRAGRTRPG
KCFRLYTEKAYKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRA
LELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQC
FVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWSYENFINFRSLKSADN
VRQQLARIMDRFNLKRSSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNV
QLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLTLAPQYYEMTNFPQCEAKRQ
LEMLQQRLESKQYQKGF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagacgcatagaagtgggcgagacctataatacgaagtcgaagaacttaaac
ccactgtccaattctagagaattcgatgtgtctgcaacctcatttaacaacaccgctgca
gcagcccctgttgctggtgcggtagctagcgcctcacgccagccgggtaatgtaaatccc
tacaatttgaagccctttacgcagcgctatttcaatctctacaagaagcgcatcactcta
ccagtatttgaatatcaagccgattttatgcgcctattgaatgaacatcaatctattgtt
ttggtcggtgaaaccggttccggcaaaaccacacaaataccccaatggtgtgttgaattt
gctacgtccaaaggtaaaaaaggtgttgcatgtacacaaccacgtcgtgtggccgctatg
tctgttgcacagcgtgtttcagaggaaatggatgtgagccttggtgaggaggtcggctac
tctatacgttttgaagactgctcatcagcaaaaacagtgcttaagtacatgacggacggt
atgctgttgcgtgaagccatgtcggaccctatgttggaacagtatcaagttatattactt
gatgaggcccacgaacgtactttggccacagatattttaatgggtgttttaaaagaggtc
ataaggcaacggaatgatctaaaattagtggtgatgtcagctactttagatgcaggcaaa
tttcaacaatatttcgataatgcacctttgatgaatgtgccgggtcgtacacatcctgtc
gagattttctatacacctgaaccagaacgtgactacttagaagcagccatacgcactgtt
atacaaattcacatgtgcgaagatattgaaggtgatatattgatgtttttaactggtcag
gaggaaatcgaagaggcatgcaagcgtataaaacgtgaaacagacaacttgggctccgat
ataggcgaactgaaatgtattccactctactccactctgcccccaaatttacaacaacgt
atttttgagcctgcaccaccgcgaaatgccaatggtgcaatcgggcgcaaagtagtcgtt
tccaccaatattgctgaaacttcacttacaattgatggtgtcgttttcgtgattgatccg
ggctttgcaaaacaaaaagtctacaatccacgtatacgagtggagagtttgcttatttca
gcaatttcaaaggcttcagcacaacaacgcgctggtcgtgctggccgtacacgcccgggc
aaatgcttccgcttgtacacggagaaggcgtataaaaacgaaatgcaggataatacatat
cctgaaattttgcgttcaaatttgggcactgtggtgttgcaactgaaaaaactcggtatt
gatgatttggtgcactttgatttcatggatccgcctgcaccagagacacttatgcgtgca
ctggaattgcttaattacttggctgcgctagatgatgatggcaatcttaccgacttgggt
gcagttatgtctgaattcccattggatccgcagttggctaaaatgttgattgccagctgt
caacataactgctcgaatgaaatactttccataacggctatgctgtcggtgccacaatgc
tttgtgcgcccgaatgaggctaagaaggctgcagatgaggccaagatgcgctttgcacac
atcgacggtgatcacttgacactactgaatgtctaccatgctttcaaacagagtagcgaa
gaccccaattggtcttatgagaatttcataaatttccgttcgttgaaatcagccgataat
gtgcgtcaacagcttgcgcgtataatggatcgtttcaatttgaagcgcagcagcactgaa
ttcacatccaaagattattatgtcaatatacgtaaagcgttggtgcagggcttcttcatg
caagtggcgcatttagagcgcaccggtcactacttgaccatcaaggacaatcaaaacgta
cagttacatccatccacttgcctggaccacaaacccgattgggtcatctataacgaattt
gtgttgactacgaaaaattatatacgcacagttacagatattaaaccggaatggttgctc
actttagcgccacaatactacgaaatgacaaactttccacaatgcgaagctaaaaggcaa
ctagaaatgctgcagcagcgtctggagtcgaagcagtatcaaaaaggattttag
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