Anastrepha obliqua (West Indian fruit fly): 129245186
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Entry
129245186 CDS
T09777
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoq03000
]
129245186
03036 Chromosome and associated proteins [BR:
aoq03036
]
129245186
Transcription factors [BR:
aoq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
129245186
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
129245186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
GRAM
Motif
Other DBs
NCBI-GeneID:
129245186
NCBI-ProteinID:
XP_054739189
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Position
4:114707170..114709977
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AA seq
737 aa
AA seq
DB search
MADTLEYSDITAEVRGVLTPGRLKLTDQHIIFKNNKTGKVEQIAADDIDLINAQKFVGNW
GLRIFTKSGSLHRFCGFRDSEHEKLGKFLKKAYKQDMVEKEMCVKGWNWGTARFLGSALS
FDKDSKTIFEIPLQHVSQCMTGKNEVTLEFHQSDDAPVGLLEMRFHIPAVESAEEDPVES
FQNNVMSKASVISASGDAIAIFREIHCLTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVL
RLFLLPHKDNRQMFLVLSLDPPIKQGQTRYHFLVLLFGPEEETSIELPFSDEELKEKYEG
KIEKELSGPLYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFI
YIHKPPVHIRFEEIASVNFARSGGSTRSFDFEITLKNGTVHTFSSIEKEEYAKLFDYIQQ
KKLRVSNIGKDKGGYNDVDFGDSDNENEPDAYLARVKAEAREKESNDDDEGSDDESTDED
FKPNEAESDVAEEYDSNVQSDSEDSDASEGGGGGAGSDSGAEKKQKPKKEKKEKKERKER
VKKTSKTKKDANKPKRATTAFMLWLNDSREQIKKDNPGIKVTEIAKKAGEMWKELKDKSK
WDELAAKDRQRYQDEMKDYKPAPSEDADDKSSGAAKKRKKETPTKKSPASAGGFKSKEYI
SDDESSSDNEDKKGKPGADSEPEKKKKKTADKSKVDKDKKKKKEESEEESEGSASGGSEE
EDEIEEDEATDDGEGSD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacactcgaatacagtgatattaccgcagaagtgcgcggcgtgctgacaccc
ggccgtttaaaactcaccgatcaacacataattttcaaaaataataaaacgggcaaagta
gaacaaattgcagcagacgatatagatttgataaatgcgcagaagttcgttgggaattgg
ggtttacgtatatttaccaagagtggctcgctgcaccgcttttgcggttttcgcgattcg
gaacatgaaaagttggggaaattcttgaagaaagcctataagcaagatatggttgaaaag
gagatgtgtgtcaagggttggaattggggtacggcacgatttcttggctctgcgctcagt
tttgacaaggacagcaaaactatctttgaaataccattgcagcacgtgtcccaatgtatg
acaggtaaaaatgaagtgacattagaatttcatcagagcgatgatgcaccggtcggtttg
ctagaaatgcgcttccacattccggctgtagagtctgcggaagaagatccagtcgagagt
ttccagaacaacgtaatgagcaaggcttcggtgatatcggcttctggcgatgcgattgct
atattccgcgaaatacattgccttacgccgcgtggtcgctacgacatcaagatcttctcc
accttctttcaactgcacggtaaaactttcgattacaaaatacccatggattctgtgctg
cgcctttttctgttgccacacaaagataataggcaaatgttccttgtgctctcactggat
ccaccaatcaaacaaggtcagacacgctatcacttcttagtgttgctatttggtccggaa
gaggagacctctatcgagttgcccttctccgatgaagagttgaaagaaaagtatgaagga
aaaatcgagaaagaactctctggcccactgtatgaggtaatgggtaaagtgatgaaggta
ttgattgggcgcaaaatcaccggacctggaaatttcattggacactctggcactgcggcc
gttggttgttcattcaaggctgccgccggttatctctatccgcttgagcgtggatttatc
tacatccacaagccaccagtgcatatacgctttgaagaaatcgcctcggtgaactttgca
cgtagtggtggttccacgcgcagctttgactttgagattaccttgaaaaatggcaccgta
cacacattcagttccatcgaaaaggaagagtatgccaaactctttgactacatacaacaa
aagaaattgcgtgtcagcaatattggcaaagataagggcggctacaatgatgtagacttt
ggtgattcggacaatgagaatgaaccagatgcctatttggcacgcgtgaaagctgaagcg
cgtgaaaaggaatcgaacgatgatgatgaaggatctgacgacgagtcaaccgatgaagac
ttcaaaccaaatgaagcggaatcagatgtggcggaggaatacgatagtaatgtacaaagc
gatagcgaagactcggacgccagcgaaggtggtggcggcggtgctggcagtgactcgggc
gcagaaaagaagcaaaaacctaaaaaagagaagaaggaaaagaaggagcgcaaagaacgt
gtgaagaaaacgagcaaaaccaaaaaagatgctaacaaaccgaaacgtgccacaacagca
ttcatgttgtggctcaacgatagccgcgaacaaatcaaaaaagacaatccaggcatcaaa
gtaactgagattgcaaagaaggcaggtgaaatgtggaaggagctaaaagataagtcgaaa
tgggatgaattggcagctaaagataggcagcgctatcaagacgaaatgaaagattacaaa
ccagcgcctagcgaggatgctgacgacaagtcgtctggtgcggccaagaagcgcaagaag
gaaacgccaacgaaaaaatcgccggctagtgctggtggcttcaagagcaaagaatacatt
tccgatgatgaatcatcttcagataatgaagacaaaaagggtaaaccgggcgctgactcg
gagccagagaaaaagaagaagaaaactgccgataaatctaaagttgataaggacaagaaa
aagaagaaggaggaaagcgaagaggagagtgagggctctgcgagtggtggtagcgaagag
gaggacgaaattgaggaagacgaagctacagatgacggcgaaggcagtgactag
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