Anastrepha obliqua (West Indian fruit fly): 129245450
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Entry
129245450 CDS
T09777
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129245450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoq03009
]
129245450
Ribosome biogenesis [BR:
aoq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129245450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Utp13
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
RMC1_N
Beta-prop_VPS8
VPS8_N
Nbas_N
Beta-prop_IFT140_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
129245450
NCBI-ProteinID:
XP_054739598
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Position
4:96930030..96932700
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AA seq
801 aa
AA seq
DB search
MSGLCEKSFAVEAQFINFYAGGDVAWSNDGDTIYCLNNTEVCAVNVPTGQLLRSYGTNVN
TAQPEFTTGNKNERLDDDQLEDEIPCFSLSPDNTLLVTAHRSGLLRLWSVDTGKVVKLWK
SQHRGPVVKIQFSTCGKIICSSGGDSSLRIWDYVHSTCVCALREFSGPALVLAFHPDAAR
TEVYAAGSDNSIYCWDYAEKRLLGQMRGHLSQVTALTFLAGENGYNFLASVSRDKVLIVW
RLADATQHKVIPMYEELEGIVCLDVNGGKKESHNVVVACASGRLKMVDCKTSKLTTLSED
CSQELRQLLHCKNTQQLAVVTVEQNIMVYKATVECVDAKKLECTNQLIGFNDEILDICFL
GENDRFLAVASNSKNIKIYDTESNMNCKIVSGHSDTVMTLSAAAGTNLLLSAGKDLSICL
WKVDPNAFTLNLVANNNSSHTSTIGCIAFGCNTATHFASVSQDGSLKVWHLKKNKDAPHS
FNLKYSALSHEKEVNSVSFSPNNKLLATASQDKTAKLWSADTNTLVGTLRGHTRGVWCVR
FSPVDQVVLTSSSDCTLRLWSLATQTCIKRFEQECTILRAEFIDYGKYIVSAASDGLLKL
WSIKTNECIQTLDAHTDRIWSLAISTRSGKCFYSGGADSKLIQWHDVTKICRNEEIDKRA
QLMQQEQTLQSLLQQRQNMKKAFVLALKLGKPKTTYNIISDYVRQRNTEPVREIINTLNS
DQRVTLMEHTKAWTTNSRHCKIANLVLHYLLSDCIAVPSEHGVPGMRNVVEVLTPYLQRH
HKRVNELTKELMFLEYIVNSI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtctggattgtgtgagaaaagttttgctgtggaagcgcaattcattaatttctatgcc
ggtggcgacgtcgcttggtccaacgatggcgacactatttattgtttgaataatacggaa
gtatgtgcagtgaatgttcccacgggccaactgctgcgctcatatggtactaatgtgaac
acagcacagcctgaattcacgacaggtaacaaaaatgaaagattggatgacgatcaattg
gaggatgaaattccttgtttctcattgtcaccggataataccttgcttgtgacggctcat
cgtagtggactgttgcgtttatggtctgttgataccggcaaagttgtgaaattatggaag
tcgcagcatcggggaccagtagtcaaaattcagttcagcacgtgtggcaaaataatttgc
tctagcggtggcgactcatctttgcgcatatgggactatgtacatagcacatgtgtgtgt
gctttgcgtgaattcagtggcccggcattagttttggcgtttcatccggatgctgcgcgt
actgaagtatatgccgctggctcggataattcaatatattgttgggattatgcagaaaag
cgactgttggggcaaatgcgcggtcacctttcgcaggtcacggccctcaccttcctagct
ggtgagaatggttataattttctggcatctgtaagtcgtgacaaagttttaattgtatgg
cgtcttgccgatgcaacacagcataaggttatacccatgtatgaagaacttgaaggtata
gtctgcttagatgtaaatggtggcaagaaagaatcgcacaacgtagttgtggcatgcgca
tctggacgattaaagatggttgattgtaaaacatccaaattaactaccctgagtgaagat
tgcagtcaggagcttcgacaattattacactgcaaaaacacccagcaattagctgtggtg
acagtggagcaaaatattatggtgtacaaagcgacagttgaatgtgtggacgctaaaaag
ctagaatgtacaaatcagttgatcggattcaatgatgaaattctagacatttgctttttg
ggtgagaatgaccgttttctagctgtggcttcgaacagtaaaaatataaagatttacgac
acggaatctaatatgaattgcaaaattgttagcgggcacagcgacactgtgatgacgctt
tcagcggctgccggcacaaatttgttattatctgccggcaaagatcttagcatttgtttg
tggaaagtggatccgaatgcattcacactcaaccttgtggccaacaacaatagcagtcac
acttcaaccattggatgtatcgcatttggttgcaatacagctacacacttcgcatcggtt
tcacaagatggcagtctcaaagtatggcatttgaagaaaaataaagatgcaccgcattcg
ttcaatttaaagtactccgcactgtcgcatgaaaaagaagtgaatagtgtcagcttctcg
cccaacaacaagttattggctacagcatctcaagacaaaacggccaaattatggagcgct
gataccaatacgttggttggtaccctgcgtggtcatacgcgtggtgtttggtgcgtgcgt
ttctccccggtcgatcaagttgtgctcacctcgtccagcgattgtacgctacgcctttgg
tcgttagccacccaaacttgtataaaacgctttgagcaagaatgcaccatattgcgcgct
gaatttatcgactacggcaagtacatagtgtcggcagcatccgatggcctactcaagttg
tggagcattaaaacgaacgaatgtatacaaacattggatgcacacacagatcgtatttgg
tcgctggcaatatccacacgcagtgggaaatgtttttatagcggtggtgcagactccaaa
ttgatacagtggcacgatgtaaccaagatttgtcgaaatgaagaaattgataaacgtgca
cagttaatgcaacaagagcaaacgctacaatccttgctacaacaacgtcaaaatatgaaa
aaagccttcgtgttggcgcttaaacttgggaagccaaaaaccacctacaacatcattagt
gattatgtacgccaacgcaataccgaaccagtgcgtgagataatcaatactttgaatagt
gatcaacgtgtgacgctaatggagcataccaaagcttggacgaccaattcgcggcattgc
aagattgccaatcttgtattgcattatttactgagcgattgcatcgcagtgccctcagag
cacggcgtacctggaatgcgaaatgtggtggaggttctcacgccatacctgcaacgccac
cataaacgcgtcaacgagctgaccaaagagctaatgtttcttgagtatatcgtcaatagt
atataa
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