Anastrepha obliqua (West Indian fruit fly): 129245538
Help
Entry
129245538 CDS
T09777
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoq03000
]
129245538
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoq03310
]
129245538
Transcription factors [BR:
aoq03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129245538
Nuclear receptors [BR:
aoq03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129245538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129245538
NCBI-ProteinID:
XP_054739721
LinkDB
All DBs
Position
4:62213433..62313126
Genome browser
AA seq
935 aa
AA seq
DB search
MLPIDSTLAASSTKASHSSPPYTLRCRPSRSATSEQHVTNNLVLITQQLQQQDNKAGGRA
SDDGTKVTTTSVNIHTCNSNYTNHSATGVTTVSANSNDNPGAGGGGGVCSSSHAANSFRN
KIPSISIIPLPVSSVASCSSGTSTSTSVVRTVTTSNKATSPPPIFNSPPRSNSGSTGANL
QSQRPLLQHQYQQTDKCTILKFDVLRKPSATTTATGDLLSRNIITTAPKTHSTAAAATAT
VTNAVTFATSAERRQQHLQALQQSIFDQEMSDDAEADAEIAALHQQVLGGNNNITAGSQP
IIVKIEPAQSFHIVDESDTRVLSLPLSDADKVGASWIDLKDIAGLQTTSATLVDVCFESP
PALLPVSANTSTSTTEAMVQTAVDTNGVSHAPAAKKRQLVVKVEQPVAAATVIETVMTPT
TAVTAAVTATAPTASATATVTRLNVNERSVQQQQQQQPQQLQQQQFQNKGTTTTTGTGIT
PSSSTGLNAGGAMTAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPR
NKQCVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEEEVKFHKAQLQAHS
DAAPDSSVFDTQTPSSSDQLHHNYNGYGYSSNEVSYGSPYGYSTSVTPQQTMAYDISADY
VDSTTYEPRGTIMDPDFVSHADGDINDVLIKTLAEAHANTSTKLEAVHDMFRKSQDISRI
LYYKNLGQEELWLDCAEKLTQMIQNIIEFAKLIPGFMRLSQDDQILLLKTGSFELAIVRM
SRLLDLSQNAVLYGDVMLPQEAFYTSDSDEMRLVSRIFQTAKSIAELKLTETELALYQSL
VLLWPERNGVRGNTEIQRLFNLSMNAIRQELEANHAPLKGDVTVLDTLLNNIPNFRDISI
MHMEALSKFKQQHPNVVFPALYKELFSIDSPQDLT
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccatcgactcaacgctcgctgccagctccaccaaagcgtcgcatagctcacca
ccttacacactacgctgtcggccatcgcgcagcgccaccagcgagcagcatgtcaccaat
aatctcgtgttgatcacgcagcaactacagcagcaggacaacaaggctggcggacgcgct
tcggatgacggcaccaaagtcaccacaacgtctgtgaatatacacacttgcaatagcaac
tacaccaaccacagtgcaacaggagtgacaacagtgagcgccaacagcaatgacaatcca
ggtgctggtggcggcggcggtgtttgcagcagcagccatgcagcaaatagttttcgcaac
aaaataccatcgatctcgattattccattgccggttagcagcgtcgccagctgtagcagc
ggtacaagcacaagcacaagtgtagtgcgcacagtgaccacctcgaataaggccacttcg
ccgccaccaatcttcaactcaccaccaagaagcaatagcggcagcaccggtgctaatttg
cagtctcaacgtccactactgcaacaccaataccagcagacagataagtgcaccatatta
aaatttgatgtactacgcaaaccatcggcgaccacaaccgcaaccggtgatcttttgtcg
cgcaatatcatcacaacagcgccaaaaacgcatagtacggcagcagccgccactgctacc
gtcacaaatgctgtgacctttgccacgagtgccgaacgtcgtcaacaacacttgcaggct
ttgcagcaatctatcttcgatcaggagatgtccgacgatgcggaagccgatgcggaaata
gcagcactacatcaacaggtgctcggtggcaataacaacatcacggcgggtagccagcca
attatcgtaaagatcgaaccggcgcaatcgtttcacatcgtcgatgaatcggatacgcgt
gtgctcagtttaccgctgtctgatgcggataaggtgggcgccagttggattgatctgaag
gatattgctgggctgcaaaccacctccgctacactggtagatgtgtgcttcgaatcgccg
ccagcattgttacccgttagcgccaatacgtccacttcgacaaccgaagcaatggtgcag
acggcggtagacacaaacggtgttagccatgcaccagcggcgaagaagcgtcagttggtt
gttaaagtagagcaaccggttgcggcggcaaccgttattgagactgtaatgacacccacg
acggctgtaactgcagctgttacagccacagcgcccacagcgtctgcaacggctactgtg
acgcggctgaatgttaatgaacgtagtgtgcagcagcaacaacagcaacaaccacagcaa
ttgcagcaacaacaatttcagaataaaggaaccaccacaactacgggaactggaataaca
ccgtcctcctcgacgggactgaatgctggaggagcaatgacagctcaaattgaaataatt
ccatgcaaagtttgtggtgacaagtcatctggcgtacactatggcgttataacttgtgaa
ggctgtaaaggtttttttcgccgatcacaaagttcagtggtgaattatcaatgccctcgc
aataaacaatgtgttgtcgaccgtgttaatcgtaatcggtgccaatactgtagactgcaa
aagtgcctaaaattgggaatgagtcgtgatgctgtaaaattcggtaggatgtcgaagaaa
cagcgtgagaaagtggaagaagaggtgaagtttcataaggcgcagctgcaagcacatagt
gacgcggcgccggatagttcagtttttgatacgcaaacaccatcgagtagcgatcaactg
catcataattacaatggctatggctactcaagcaatgaagtgagctatggcagtccctac
ggctactcgacatcggtgacaccgcaacagacgatggcctacgatatatcagcggattac
gtcgacagcaccacgtacgagccgcgtggcacgataatggatccggacttcgtcagtcat
gctgatggcgacatcaatgatgttcttataaaaaccttagccgaggcacatgcaaacaca
agcaccaaactcgaagccgtacacgatatgtttcggaagtctcaggatatttcgaggata
ctttactacaagaatctgggtcaagaggagctgtggctagactgcgctgaaaagctaaca
caaatgatacaaaatataatcgaatttgcgaaactgatacccggatttatgcgattaagt
caggatgatcagattctgctactgaaaactggatcattcgaattggccatcgtgcgtatg
tcacgattgctcgatctctcacagaatgcggtactttatggtgacgtaatgctgccgcag
gaagcattctacacatccgattcggacgagatgcgtctggtatcgcgaatctttcaaacg
gctaaatcgatagctgaactgaaactgactgaaacagagttggcgctgtatcaaagttta
gtgctgctctggccagagcgaaatggggtgcgcggtaatacagaaatccagaggcttttc
aatttaagcatgaatgcaataagacaggagcttgaagcgaaccatgcgcccttaaagggc
gatgtgactgttttagatacattgttaaacaatataccgaatttccgcgatatctccatt
atgcatatggaagcactgagcaaatttaagcaacaacatccgaatgtcgtctttccggcg
ttatacaaagaactgttttcaatagattcgccgcaggatctcacataa
DBGET
integrated database retrieval system
