Anastrepha obliqua (West Indian fruit fly): 129245579
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Entry
129245579 CDS
T09777
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03030
DNA replication
aoq03410
Base excision repair
aoq03420
Nucleotide excision repair
aoq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129245579
03410 Base excision repair
129245579
03420 Nucleotide excision repair
129245579
03430 Mismatch repair
129245579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoq03032
]
129245579
03036 Chromosome and associated proteins [BR:
aoq03036
]
129245579
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129245579
DNA replication proteins [BR:
aoq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129245579
DNA Replication Termination Factors
ELG1-RFC complex
129245579
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129245579
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129245579
Check point factors
HRAD17(Rad24)-RFC complex
129245579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_16
AAA_22
AAA_assoc_2
AAA_24
Mg_chelatase
AAA_11
Rad17
DUF815
Gp44_lid
AAA_30
RuvB_N
AAA_14
AAA_19
bpMoxR
AAA_5
SLFN-g3_helicase
ResIII
DNAX_ATPase_lid
AAA_7
AAA_3
AAA_25
Penaeidin
Motif
Other DBs
NCBI-GeneID:
129245579
NCBI-ProteinID:
XP_054739808
LinkDB
All DBs
Position
4:96883310..96884768
Genome browser
AA seq
359 aa
AA seq
DB search
MQAFLKTGKTTAHDKTQSGGSSVTASSSGERRKPPAPWVEKYRPKSVEDVVEQSEVVAVL
RKCVEGADLPNMLLYGPPGTGKTSTILAAARQIFGDLYRDRILELNASDERGIAVVRTKI
KNFAQLTASGTRPDGRPCPPFKIIILDEADSMTHAAQAALRRTMEKESRSTRFCLVCNYV
SRIIEPITSRCTKFRFKSLGDEQMISRLRHICELEDVKIDENAYKSIVQISGGDMRRAIT
TLQSCYRLKGTSNTISTADLLEMSGIIPENYLVEFLEVCQAGNYSKLEDFVRQIGYEAYS
IGQMLEQFNDYVLRCPSLTNKQKALICDKLGECSFRLQDGGSEYLQIMDLGCAIILALK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttctgaaaactggcaaaactactgcccatgataagacgcagagtggtggc
tcctcggttaccgctagcagcagtggtgaacgtcgtaaaccaccggcaccttgggttgaa
aaatatcgcccaaagagtgtggaggatgttgtcgaacagtcagaggtggtggcagttctg
cgcaaatgcgtggagggtgcagatttaccaaatatgcttttatatggcccacctggaact
ggtaaaaccagtacaatattggcagccgcacgccaaattttcggggatctttatcgcgat
cgcatactggagctaaacgcttcggatgaacgtggcattgcagtagtacgcacaaaaatc
aagaattttgcacaactgaccgcgagtggcacacgaccagatggtcgcccatgcccacct
tttaaaattatcatacttgatgaagctgattcaatgacacatgctgcacaggctgcttta
cgtcgtaccatggagaaggaaagtcgcagtacacgtttctgtttggtgtgcaattatgtg
tcacgtatcattgagccgatcacatcgcgttgcaccaaattccgtttcaagtcgttgggt
gatgagcaaatgatttcgcgtttgcgccatatttgtgaactagaggacgttaaaattgat
gagaatgcttataaatctattgtgcagatatctggcggtgatatgagacgtgcgataact
acattgcagtcgtgctaccgtcttaaaggcacatcaaataccattagtacggcggacttg
ctggaaatgtcgggcattataccagaaaattatttagtagaatttttagaagtatgccaa
gctgggaattattcaaaattggaagactttgtgcggcagataggctatgaagcttatagt
attggtcaaatgttggagcaattcaatgactacgttcttcgatgtccgtcactaactaac
aaacaaaaagcgttaatctgtgacaagcttggtgaatgctcttttcgtctacaagacggt
ggctcagaatatctacagattatggacttgggttgcgcaataatactggcgctcaaatag
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