Anastrepha obliqua (West Indian fruit fly): 129247082
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Entry
129247082 CDS
T09777
Name
(RefSeq) nipped-B protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoq03036
]
129247082
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
129247082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
129247082
NCBI-ProteinID:
XP_054741971
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All DBs
Position
5:86222792..86229585
Genome browser
AA seq
2085 aa
AA seq
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MTDPDIPSVPVTTLACLTSLSDLLSELPVPDTLASVTSLNKSLLFHTLVAKESNNLLSVR
DDNLVKQLVNAIEQTNSEIIELKSQYAIEQFGTNINTYPELLQGIYSYSPTVFNTNNGKI
NLQKNNRQQTHQQQQQQWYNVVHGQRGGNSTLQHDELQRIQQQSPLDVNNSTISNDLPSG
IFPTMEMTSMQNNNFDIQTPKKRKQHTITDQGQMLPVEQQKVDFENMACFQNASSLSVTM
NSISPETQQNIVAQQFNAAPPTAIQQPIVHTQNHQNQFSAPMPDNICTATPVVSNAQFQV
NNGYTQHNITALVPGTPALEPGTPALAPGTPTQPPGTPALVPGTPALAPGTAVQTPETPV
AKEVKSNSDATLEPIKSEIVNDVPKTNTEASSKPAEKSNVRVCINRLKEKDASLMQQSIQ
KFVKKSPESARKFGLISPPEVETPTTATPAPPPVPTSAPAKMAATTAATESALNAKKLTT
KAAESDDAFTLMKTNDKPLAIKRKIPPSVDEVPPEQIHSLPKLRCVERVVSTPSAKSSKD
EILRSQTYQQFMRNLEQIIETLDDTEIPNFDTDEVDENIECISSRMLNIMSNDIAKLKAK
YVLDVIPKNKLALLVNYAMRNVYLAKNYSAGPDDEDDIVDDEIMEKILNGIEACLLICNI
YCTSKDIKFLQEDNISLIIKFMHFQFRETIFPSYDPVYTVKSMKKTDNRKKSKIYQNYNR
SLQLLYSKATELMKVFVTLFDKYIFVDTIILPLSTLSIEPFFVDNIETLQFVCLELVTTI
FRKEEYVKIRSSILGDILTSIDRLPSSKKNLRPFKLINNSGNIQMVTALVLQLIQCVTIL
PDVMSSNSQNKRKALPQYGELASQASSFSTQTDRQNIDVIVLKKYDVAISIGGNFLTTFL
NKCKSRSNETDFRPIFENFIYDLLATVNKPEWPSSELLLSLLGTMLVRYVSDKSIEQSIR
LVSLDYLGIVAARLRKDAVDSRYKVNVIDSMIRYIKVEQEKEGDLPTSNNKVELKEDERV
EFLQKILLDFLAANAHVDNPIWDYARHFYLTQWYRDIIYQRRNINEGAKRDTSRKKSSRK
RRTEADLSGSDSNDDSGDDINFVNVDSRVGGDCTMGDQELNMERFNALDKRKQCLLNNIN
PYSTLGDSNHAQHIKTYIDYNNALLIAQYLASKRPFSKSFDGYLKKIILVVNEPSIAIRT
RAMKCLANIVEVDPMVLRRKDMQMGVNQKFLDAAISVREAAVDLVGKFVLSNEELIDQYY
DMLSTRILDTGVSVRKRVIKILRDICIEYPTFQKIPEICVKMIRRVNDEEGIQKLVTEVF
MKMWFTPLHKNDKDGIHLKINQIIDVVNIAHDTGTAWLEGLLNSIFQPKENTAKGDDGMK
DTLHKKTEPPADILLSCQQLADGLVARLIELEDTDNTRMLGCITTLHLLAKVRPQLLVQH
AITIEPYLNIKCHPTTAPKFICAVADILEKVVPLVNNASESFLASLEEHLMLLVVSLNQA
VVKSCVSCLGAIVNKITKNYALIRDCFQKFYRILDQTRSQILQNRQINNLSAAIRRSLFT
IGILMRYFDFKSKEVVGETNGLSPTICSDVFDCLMFFAQYKSHDIRKEALIALGSFCVMN
DDYLTNTKLKRYYCDLLLSETSDAGIKIICLRNIWIYLTESEMHMYNKEKDWDKQSKTED
LKEMNDVSSGMSSRIIQLYLQEIFECFLNSDDNVRLWAVKVIQIVLRQGLVHPVKTVPYL
ICLSTDSKLESAHRADALLKDIDKMYNGFVNMKAQLGLQFSFRLQGILQHNLKGKGKVIR
GYVKRHMDAMPTALNDFLYTLLRPIKTQRRALVQTIIKQFDDQKTSLQQMLYIADNLSYF
PYVVQDEPLYLIHQVDLLISIVGTNLLTTFKENLKPSVNVGDVLEDDDDEDDPDVLFKRL
PENAFEMQKCIMSSQACMLLLILKDHLKHMYSLTDSKISRYSPSEPKLYEKAVVRKTVQD
FNPKTTIDIIKKQQEAMLTSNVANSKTNLNDDERMDLVIKYLDFKKLMLKLDPDDEDSDD
EGRNKSKLNLTANTSQLNSSSASANKSTDDSCLDVDKSMKQENLT
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccccgatattcccagtgttccagttacaactttggcttgcttgacaagtttg
tcagatttacttagcgaacttccagtgccagacacactagcgagtgtgacttcgttaaat
aaatctctgctattccacaccctagtggctaaggaatcgaacaatttgttgtctgtgcgg
gatgacaacctcgtgaagcaactggttaatgccatcgaacagacaaactctgaaataata
gaacttaaatcccagtatgccattgaacaatttggtactaatataaacacatacccggaa
ctgctacagggcatttacagttatagtcccacagtgtttaatactaataatggcaaaata
aatctacagaaaaataataggcaacaaactcatcaacaacagcaacaacaatggtacaat
gtagtgcacggtcaacgaggcggcaattcaacgttgcaacacgacgagctacaacgtatt
caacagcaatcgccactggatgttaataactcaactatatcaaatgatttgccaagtggg
atttttccaacaatggaaatgacttccatgcaaaataataattttgatattcaaactccg
aagaaacgtaagcaacatacaataacggatcaagggcaaatgcttccggtcgaacaacaa
aaagtcgatttcgaaaatatggcgtgtttccagaatgcgagttctttatcggtaacgatg
aattcaataagtcccgaaacgcaacaaaatatagttgcgcaacaattcaatgcagcgcca
ccaaccgcaattcagcagcctattgtgcatactcaaaaccatcaaaatcaattttccgcg
ccaatgccagacaacatttgcacagcaacgcccgttgtatccaatgcccaattccaagtt
aataatggatatacccaacataatatcactgctctagttccaggaactccggctcttgaa
ccaggaactcctgctcttgcgccaggaactcctactcaacctccaggaactcctgctcta
gttccaggaactcctgctctagctccaggaactgctgttcaaactccagaaactccagtt
gcaaaagaagttaaatcaaatagtgatgcaacgctggagccaattaagagtgaaatcgta
aatgatgttcccaagaccaatactgaagcgagcagcaaacccgctgaaaaatccaatgtt
cgggtatgtataaatcgacttaaagaaaaggatgcttctctcatgcaacaaagcatacaa
aaatttgtaaagaaatcaccagagtccgcaagaaaatttggcttaatatctccacctgaa
gtggagacaccaacaacagcaacgccagcaccaccgccagtaccgacatcagcacctgct
aaaatggctgcaacaacggcagctacagaatctgcgctaaatgctaaaaagttaactacc
aaagcagcagaaagcgatgatgcatttaccttgatgaaaacgaacgacaaaccactagca
atcaaacggaagattccaccttccgttgacgaagttccaccagaacaaatacactcccta
ccgaaattacgttgtgttgagcgcgtcgtttccacgccttccgcaaaaagctccaaggac
gaaattttacgatcgcagacctatcaacagtttatgcgaaacttggagcaaattattgaa
acgttggacgacacagaaatcccaaatttcgataccgatgaggtggacgaaaacatcgaa
tgtatatcgtctagaatgctaaacataatgagcaacgacatcgctaaattaaaagcaaaa
tatgtcttagatgttataccgaaaaacaaattggccctattagttaattacgctatgcga
aatgtctatttggctaaaaactattctgcaggcccagatgacgaagacgatatcgtggac
gatgaaattatggaaaagattttaaatggcatcgaagcttgcctgctaatttgcaacatc
tattgcacttcgaaagatatcaaattcttgcaagaggacaacatttcacttatcattaaa
ttcatgcactttcagtttcgggaaacaatctttccgtcgtacgatccggtttatacagtt
aagagtatgaagaagacggataatcgtaagaaatcgaaaatttatcaaaattataaccgc
agcttgcagttgctctactcaaaagccactgagctaatgaaagtcttcgttacacttttc
gataaatacatatttgtggacaccattattttgccgttgtccaccttgtccatcgaacca
ttctttgttgataatatcgaaacgttgcaatttgtttgcctcgaattggtcacaaccata
tttcgcaaggaggagtacgtcaaaatacgcagtagtatactcggcgatatattgacttca
atagatcggttgccgtcttcgaagaaaaacctacggcctttcaaactaatcaacaacagt
ggcaacatacaaatggtcaccgctttggtgctgcaactgattcagtgcgttaccatttta
cccgatgtcatgagcagcaactcacaaaacaaacggaaggcattaccacaatacggagaa
ctggctagtcaggcttccagtttctccacccaaaccgatcgtcaaaacatcgatgtgatt
gttctgaagaaatacgatgttgctataagcataggaggcaattttctaacaacgtttttg
aataaatgcaagtcgcgctcaaatgaaactgatttccgtccaatattcgaaaattttatt
tacgatctcctggcaaccgtaaacaaaccagaatggccctcatccgaattactgctctcg
cttctgggcacgatgctggtgcgttatgtgtctgacaaatctatagagcagagcatacgt
ttggtttcgctggattatttgggcatagtggctgcgcgtttgcgcaaggatgccgtagac
tcgcgctacaaggtgaatgtcatagactcaatgatcagatatatcaaggtggagcaagag
aaagaaggcgacttgcccactagcaacaacaaggtcgaattaaaggaagacgagcgcgtt
gagtttctgcaaaagatactcctggattttctagccgccaatgcacacgtggataatccc
atctgggattacgccagacacttctatttgactcagtggtatcgtgatataatatatcag
cgccggaatattaacgaaggcgccaagcgcgacacgtcacgaaagaagagctcacgcaaa
aggcgcacggaagccgacctgtccggcagtgactcgaatgacgacagcggtgatgatatt
aatttcgtgaatgttgatagtcgtgtcggtggcgattgcactatgggtgaccaggagctg
aatatggagcgtttcaatgcgcttgataaacgcaagcaatgcctgctgaataacataaat
ccatactcaacgctgggcgattccaaccatgcacaacacatcaaaacttatatcgattac
aacaatgcacttttaatagcacaatatttggccagcaaaagaccatttagcaagtcattt
gatggctacctgaaaaagataatattggttgtaaatgagccgtcgattgcaataagaaca
cgcgccatgaaatgcttagctaacatagtcgaagttgatcccatggtgctgaggcgcaag
gacatgcaaatgggcgtaaaccaaaagttcttggacgctgcaatatcggtgcgcgaggca
gccgtagatttagttggtaaattcgtattgagcaacgaagagctgatcgaccagtattac
gatatgttgtcgactagaattctggacacgggcgtgtctgtgcgcaagcgtgtcatcaaa
attctgcgcgacatatgcattgagtatccgacgtttcagaagattccggaaatatgcgtg
aaaatgatcaggcgggtgaacgacgaggagggcatacaaaaactggtgacggaggttttc
atgaaaatgtggtttacgccgttgcataaaaacgacaaggacggcatacatttgaagatt
aatcagattatagatgtagttaatatagcacacgacaccggcaccgcctggttggagggc
ctgttgaatagcatatttcagccgaaggagaatacggccaagggcgatgacggcatgaag
gacacgctgcacaagaaaactgagccgccggctgatattttgttgtcatgccagcaattg
gccgacggcttggtcgcgcgtttgatcgaactcgaggacacggacaacacgcgcatgttg
ggctgcataaccacattgcatttattggcgaaggtgcgcccccaactgctggtgcagcac
gcaattactatagagccttatctgaacatcaaatgccaccccacaacagcaccgaaattt
atttgcgcagtggcagatatactggaaaaggttgttccactggttaataacgctagcgaa
tcgtttttggcttcgttggaagagcatttgatgttactggttgtgtcactcaatcaagcg
gtggtaaagagttgcgtctcgtgcttgggcgcaatcgtcaacaaaatcacgaagaattac
gctttgataagagattgctttcagaagttttatcgcattttagatcaaactagaagtcaa
atactgcaaaataggcaaattaataatttaagtgcagctatacgccggagccttttcacc
attggcatcctgatgcgttatttcgacttcaagtcgaaagaggtggtaggcgaaacaaac
ggcttatcaccaacaatatgcagcgatgtcttcgattgcttgatgttcttcgcacaatat
aaaagtcacgacatacgcaaggaagcgctcatagcgttgggctcattttgtgtgatgaac
gatgattatcttacgaatacgaagctgaagcgctactactgcgacttgctactctcggaa
acaagtgatgctggcattaagattatttgcttgcgcaatatttggatttatctgactgag
tcggaaatgcatatgtacaataaggagaaggattgggacaaacagtcgaaaaccgaggat
cttaaggagatgaacgacgtgtcgtcgggtatgtcgagtcgtatcatacaactgtatctg
caagaaatcttcgaatgtttcctaaacagtgatgacaacgtgcgtttatgggccgtcaaa
gttatacaaatcgtgctgcgacaaggcctcgtgcatccggtcaagactgtgccatatctt
atatgcctaagcacagattcgaaattggagtctgcgcacagagcggatgccttgttgaaa
gacatcgataagatgtacaatggttttgtgaatatgaaagcgcagctgggactgcagttt
agtttcagattgcagggcattttgcagcacaacctcaagggcaagggaaaagtcatacgt
ggctatgttaaaagacacatggacgcaatgccaacagcgctgaatgactttttatatacg
cttttgcgcccaatcaagacgcagcgacgcgcgctagttcaaacgattataaagcaattc
gatgatcaaaaaacatcattacaacaaatgctatacatagcggataatttgtcttacttc
ccgtatgtggtgcaagatgagccactatatttgatacatcaagtcgatttactcatttct
attgttggcactaatttgctcaccactttcaaggaaaatctaaagcccagcgtcaatgtg
ggggacgttttggaagatgatgacgacgaagatgatcccgatgtgctgttcaagcgtctg
ccagagaatgcatttgagatgcaaaagtgcataatgtcttcacaagcgtgtatgctccta
ctaattctaaaggatcatctgaagcatatgtatagtcttacggatagtaaaatatcaagg
tactcaccgtcggagccgaagttgtacgagaaggcagtagttcgtaaaacagtgcaagat
tttaaccctaaaacaacaatagatattattaagaagcaacaggaggcgatgttgacctcg
aatgttgcgaatagcaaaaccaatttaaatgacgacgaacggatggatctggttatcaaa
tatttagattttaaaaaattaatgcttaaactggatcccgacgatgaggattcagatgac
gagggtcgcaataaatcgaaactgaatttaacagctaatacgtcacagctgaattcgagt
tcagcgagtgcaaataagtcgacagatgacagctgtttagatgtggataaatcaatgaag
caagagaatttgacttaa
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integrated database retrieval system
