Anastrepha obliqua (West Indian fruit fly): 129247528
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Entry
129247528 CDS
T09777
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129247528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129247528
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129247528
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129247528
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
129247528
NCBI-ProteinID:
XP_054742659
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All DBs
Position
1:59274310..59285942
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AA seq
469 aa
AA seq
DB search
MANLNFQQPPRSLANASMTGRTTAGFGGSSLSGHITPTSGMFPTGGANYGQTQQPQLSPN
RNAQLSVGGPALSRGGRANIFGQQTFERRAMQALGGGPMSNMGSFMQSGRGGYGSGGGAS
GFPTVFGGSGDTATPALLDPTEFPSLTNVRGQNDQSLPQTNPLQPPGSKPYGNFFTSFGM
VKQPTSEQSEFTMSNEDFPALPGTQISDGTTNSGITENNLDGAEKAMNSIVGGSGLGAVG
SGVGVSGSSGGGSSGRGIDHQHDNSSNDKLVKSGVQTSPDGKVTNIPASMVNNQFGMVGL
LTFIRAAESDPNLVTLALGNDLTGLGLNLNSQESLHPTFAGPFADHPCRVQDVECNVPTE
YLINYAIKDKLSAPLLNKLQEDLLFFLFYTNIGDIWQMMAAAELYGRDWRFHIEEKIWIT
RIPGNNQGKFYYFDAQSWKRMSKDFQIDAEKLDKCPNISALVNMNGQSV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttaaattttcaacaacctccgagaagtttagcaaacgcctcaatgacgggg
cgaactacagctggatttggtggtagttcactttccggtcatataacacctacgtctggc
atgtttccaacgggcggtgcaaattatggacaaacgcaacaacctcaactctcaccgaat
cgcaatgcacaattgtcggtgggcggtccggcgttatcgagaggcggtcgcgcgaatata
tttggtcaacaaaccttcgagcggcgagcaatgcaggcgttaggtggcggccctatgtca
aacatgggcagcttcatgcaatcgggacggggtggctatggtagtggaggcggtgcaagt
ggttttcccactgtttttggtggcagtggagatacggcaacgcccgcgctgctcgatcca
acggaatttccatcgttgacgaatgtgcgtggccagaatgatcaatcactgcctcagacg
aatcccctccagccaccgggaagcaaaccttatggtaatttctttacctctttcggcatg
gtgaaacaaccaacgtcggaacaatcggaattcaccatgtcgaatgaagatttccctgcg
ttaccgggtactcaaatctccgacggtacaacgaactcgggcatcacggagaacaatttg
gacggtgcggagaaggcgatgaactcaattgtgggcggcagtgggttaggtgccgttggg
agtggcgttggcgttagcggtagtagtggtggcggcagtagtggtagaggaatcgaccat
cagcacgataattccagcaatgataagcttgtgaaaagcggagtgcaaacttcacctgat
ggcaaggtcacaaacatcccagcgagtatggtgaataaccaattcggcatggtgggtctc
cttacattcatacgagcggcggaatcggatccaaatttggtgacgttagcgttaggaaat
gatcttaccggcctcggtctgaatttgaattcacaggaaagtttacatcctacattcgct
ggaccgtttgcggatcacccctgcagagtacaagacgttgaatgcaacgtgccaaccgaa
tatctgatcaattatgcgataaaggataaactgtccgcaccgttactgaataagctgcaa
gaagatctgctatttttcttgttttacacgaatatcggcgacatttggcaaatgatggcc
gctgcggaactttatggccgcgattggagatttcacatagaagagaaaatatggattact
cgaattcctggaaataatcaaggaaaattctactacttcgatgcgcaaagttggaaacgt
atgtccaaggatttccaaatcgacgccgagaaattagataaatgtcccaatatatctgcg
ttagtgaacatgaatggacagtctgtataa
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