Anastrepha obliqua (West Indian fruit fly): 129247822
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Entry
129247822 CDS
T09777
Name
(RefSeq) ATP-dependent RNA helicase vasa isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoq03036
]
129247822
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129247822
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129247822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129247822
NCBI-ProteinID:
XP_054743112
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Position
5:complement(42711751..42756531)
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AA seq
621 aa
AA seq
DB search
MSEWGDEEQDTGRGFGNGYDHYKDNGEENIANEENEYNDIEIADDGTCDFGNRRGRGGGR
GGRGGRGDRHGGGYGGGRRNNEENANGERNGGGFHSGRGGRGGGGRGGRGSRNNFGERNG
FNGDRHGDDQGFNNNKGENEGEQKQREFYIPPEPTDNEDEIFSSGISSGINFSKYDNIPV
RVSGENAPPPLKSFETAGLRDLIMDNVRKSGYKVPTPIQKTAIPVIMDGRDLMACAQTGS
GKTAAFLLPIINGILGESCDLSIGKPQAVIVSPTRELAIQIFSEARKFALGSYLKISIVY
GGTSSKHQGENIAKGCHILICTPGRLLDFVEKGFITFEETRYVVLDEADRMMDMGFKDSV
NTVMNHPTMRPMEERQNLMFSATFPEEIQRLAGAFLSNYIFITIGVVGGACSDVTQEIFE
VKKFQKRSKLMELLSESSDGTIVFVETKRGADFLASLLSETEFPTTSIHGDRLQRQREMA
LADFKSGKMKVLIATSVAARGLDIKNVKHVINYDLPSSIDEYVHRIGRTGRVGNNGRATS
FFDPDQNAAMASDLVKILEGASQEVPEFLRCCSGGGGGGDGLGSSGSSRFGGRDVRKNVQ
SDDNFITSAGPTPLEEEEEWD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatggggcgatgaagaacaggataccggccgtggtttcggtaatggctatgat
cattacaaagataacggcgaagaaaacatagccaatgaggaaaatgaatacaatgatatt
gaaattgcagacgacggaacttgtgattttggaaatagacgaggtcggggcggtggacga
ggtggtcgtggtggtagaggtgacagacatggcggtggttatggcggcggacgtcggaac
aatgaagaaaatgcaaatggagagcgcaatggcggtggttttcatagtggccgtggaggt
cggggcggtggtgggcgtggaggtcgcggaagccgcaataatttcggcgagcgtaatggt
tttaatggggatagacatggtgatgaccaaggctttaacaataataaaggcgaaaatgaa
ggcgaacaaaaacaacgcgaattttacataccaccagaacctaccgataatgaagatgaa
atctttagtagcggaatttcatcgggaatcaacttttccaaatacgacaatattccagtc
cgggtgtcaggtgagaatgcgccacccccacttaagagttttgaaactgcgggcttgcgt
gatttgatcatggataacgttcgtaagtccggttataaggtaccaacacctatacaaaaa
accgccattccagtaattatggatggaagagatttaatggcatgtgcccaaacgggttcc
ggaaaaacggccgcattcttgcttccaatcatcaatggcatcctaggagaaagttgtgat
ttgtcaatcggtaaaccgcaggcggtaattgtgtctccaacacgcgagttggcaatacaa
attttctctgaagctcgaaagtttgcgctgggctcttatttgaagatcagcattgtttac
gggggcacttcaagcaaacatcaaggcgaaaatatcgcaaaaggatgtcacattttgata
tgcactccgggtcgtttattggactttgttgaaaagggtttcataacatttgaagaaacg
cgctatgtagtgctggatgaggccgaccgtatgatggatatgggttttaaagacagtgta
aataccgtgatgaatcatccgacaatgcgaccaatggaggaacgacaaaatttgatgttt
tctgctactttccccgaggagatacagcgtttagctggcgcctttttgtccaactatata
ttcattaccattggtgtagtaggcggcgcgtgctccgatgtcacccaagagattttcgaa
gtgaaaaaatttcagaagcgttccaaattaatggaattgctgagcgaaagtagtgatggc
accattgtctttgttgaaacgaagcgtggagcagatttccttgcgtcccttctatcggaa
accgaatttcctacaacttctatacacggcgataggttacaacgtcaacgagaaatggct
ttagcagacttcaagtctggaaagatgaaagtgctgatagcaacatcagtcgctgcgcgt
ggcctagatattaagaacgttaagcacgtcatcaactatgatcttccaagttccatcgac
gaatacgtccatcgtattggtcgtacaggtcgagttggcaacaatgggcgtgcaactagt
ttctttgatcccgatcaaaatgcggctatggcaagtgatttagtgaaaattcttgaaggc
gcatcacaggaagtgcccgaatttctccgatgctgttcaggtggaggtggaggtggcgat
ggactgggtagttcaggtagtagtaggtttggcggtcgggacgtacgaaaaaatgtgcag
tctgatgacaacttcattacctcggcagggcctactcctttggaggaggaggaagagtgg
gattaa
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