Anastrepha obliqua (West Indian fruit fly): 129248052
Help
Entry
129248052 CDS
T09777
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03013
Nucleocytoplasmic transport
aoq03015
mRNA surveillance pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129248052
09122 Translation
03013 Nucleocytoplasmic transport
129248052
03015 mRNA surveillance pathway
129248052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129248052
03041 Spliceosome [BR:
aoq03041
]
129248052
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129248052
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129248052
Spliceosome [BR:
aoq03041
]
Complex C
Other components
EJC/TREX
129248052
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129248052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_19
MoaE
Motif
Other DBs
NCBI-GeneID:
129248052
NCBI-ProteinID:
XP_054743446
LinkDB
All DBs
Position
5:complement(106675448..106678402)
Genome browser
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTVAEVPEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPAVKVGVFFGGLSIQKDEESLKGTTPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgatgatcttttggattatgaggatgaggagcagaccgagactacggtc
gccgaggtcccagaagcaccaaagaaggatgtgaaaggcacatacgtgtcaattcatagc
tcgggctttcgtgattttctactgaagccagaaattttgcgtgcaatagtcgactgcggt
tttgagcatccgtccgaagtgcaacacgagtgtataccacaggccgtgctaggaatggat
attctctgccaggccaagtcgggtatgggtaagactgcagtttttgtgcttgcaacttta
cagcagttagaaccgacggaaaatgtggtatacgtattggttatgtgtcatactcgtgaa
ttagcatttcaaataagcaaagagtatgaacgattttcaaagtacatgccagcagtgaag
gtgggtgtattttttggtggtttgtcgattcaaaaagatgaagaatctttgaagggcacc
acgccacacattgttgtaggcacacctggtcgtatccttgccttgatacgcaacaaaaaa
cttaacctcaagcatttgaagcattttattcttgacgaatgcgacaaaatgttggaacaa
cttgatatgcgtcgcgatgtacaggagattttccgcagcactccacatggaaaacaagtc
atgatgttttccgccacgttgagcaaggaaatacgtccggtgtgcaaaaaattcatgcaa
gatcccatggaagtttatgtggatgatgaagcgaaattgacattacacggattacaacag
cattacgttaagctgaaggagaacgagaaaaataaaaaattgttcgaattgttggatgta
ctcgaattcaaccaagtcgtgatttttgtaaaatctgttcaacgttgcatggcgttggca
cagttactaaccgaacaaaactttcccgcaattggcatacatcgtggcatgactcaagaa
gagcgtctaaatcgctatcaacagtttaaagattttcaaaagcgtattctggtagccacc
aatctttttggtcgtggcatggatatcgagcgtgtaaacattgtatttaactatgatatg
ccagaagattcggacacttacctgcatcgtgtggcccgtgctggtcgtttcggtaccaaa
ggtttggctataacatttgtttcggatgaggcggatgctaaaattttgaatgaagtgcaa
gacagatttgatgtcaatatcactgaattaccagatgaaattgatttatcatcgtatatt
gaaggacgataa
DBGET
integrated database retrieval system
