Anastrepha obliqua (West Indian fruit fly): 129248364
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Entry
129248364 CDS
T09777
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129248364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129248364
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129248364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
AAA_17
Motif
Other DBs
NCBI-GeneID:
129248364
NCBI-ProteinID:
XP_054743863
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All DBs
Position
5:11125282..11128698
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AA seq
926 aa
AA seq
DB search
MEVINANRQEPQLNLDVNAQRSFIKYYAKLEDKPPTTVRFFDRADFYTVHGSDDCELIAK
FIYKSTAFVHKLLPDEPDETLGYVTLSKANFNAAIRELLLVRNFRVEVYVRPGGAAASSN
NWELEYRGSPGNLIQFEEILFGNREILVSNNLLSLQVRLVDGNQRRLGVAFVEQNDCQFH
VLEFIDNDFYTELEAMVVLLGPKECLLPSIDGEYAAVKQLLERNNVGVTVPKRSAATPAE
KNDLLQDLNRLIRFARGQQEDALTLPEMQLSMAMEALRVAIKYLNLTNDASNLGHYEMKH
LNLKRFVHLDSAAVAALNILPKPGTNPNSPGFRCQSILGVLDHCRTPQGHRLLSQWVKQP
LRSIEILNDRHDIVQCLLESPGTLSTLHDDYLKRIPDVLMLTKRLLRQKANMQDLFRVYQ
VILRTPRIVNTLLSLEHATVKNVLCDAMKSYLEDLSGLKQLVEQVVDFEAIEAGDYLVKS
SFDEQLQDMKSHMSRLLSKMERLQQKAADDLNMEKSQVRLENVAKIGYHFRVTLKDDSEL
RKNKNYKILDVVKGGVRFTNDKLTEYSEEYGTLCDQYEEQQKSVVEEIIKVAIGYAAPLS
SLNNELAQLDCLVSFAMAALAAPIPYVRPKMIKEGSGVLELKDLRHPCLELQEHVTFIAN
SVAFKKDICNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCAEATINMLDSILGRVG
ASDNIVKGLSTFMVEMIETSGIVRTATENSLVIIDELGRGTSTYEGCGIAWSIAEHLAKE
TKCFTLFATHFHEITNLAESVETVKNCHMAAVADAENFTLLYQVRPGIMQKSFGIQVARL
ANFPETVVHNAQRIYREFEDEYADKQNETDKELLDKIDAAMERLTTTGNDIDIDEAELSE
LVEKFASDIRQLDSEYFQAALSVEGN
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaataaatgctaataggcaagaaccacaactgaatctcgatgtcaacgctcaa
cgcagtttcattaaatactatgccaagttggaggataaaccaccaacaactgtgcggttt
ttcgaccgcgctgatttttacaccgtgcatggctcggatgattgtgagctcattgcaaag
ttcatctacaaatctaccgcgtttgtgcataaactcttgcctgatgaaccggatgaaacg
cttggttacgttacactatcgaaagccaatttcaatgcggctatacgggagttactacta
gtgcgcaactttcgagtggaagtctatgttcgtcccggtggcgctgcagccagcagcaac
aattgggaacttgagtaccgtggctcgccgggcaatttgattcagttcgaagaaattttg
tttggcaaccgcgaaatacttgtgagcaacaatctgttgtcgctgcaagtgcgcttggtg
gacggcaatcagcgacgcttaggtgttgcttttgtggaacaaaacgattgtcagtttcat
gtattggagtttattgacaacgacttctacaccgagctcgaggcaatggtagtgctgttg
gggccgaaagaatgtctattgccatcaattgatggtgagtatgcggcagtgaagcaactg
cttgaacgcaataatgtgggcgttactgtaccgaagcgctcagcggccacaccagctgag
aaaaacgatttgctgcaggacttaaatcgcttgatacgttttgctagggggcagcaggag
gatgctttaacattacccgagatgcaactgtccatggctatggaagccttgcgtgtggct
atcaaatacttgaatttgactaatgatgccagcaatttgggtcactacgaaatgaagcac
ctgaatttgaaacggtttgtgcacttggactcggcggctgttgccgcgctcaacatactg
ccaaagcctggcacaaatcccaactcgccaggttttcgttgccaaagcattctcggcgta
ctcgatcattgtcgcacaccgcaaggtcatcgcctactttctcaatgggttaagcaaccg
ctacgtagtatcgaaatactaaacgatcgacatgatattgtgcagtgtttgctggagtcg
ccaggcacattaagtacactacacgatgattacttaaaacgtattccggacgtgctgatg
ctaaccaaacgtttgctacgacaaaaggcaaacatgcaggatctctttcgtgtgtaccaa
gttattttgcgcacacctcgcatagtcaacacgctactaagtcttgagcatgcaactgtg
aaaaatgtgctctgcgatgcgatgaagagttacttggaggacttgtctggtttaaagcag
ttagttgaacaagtggtcgattttgaagctatcgaggccggcgactatctcgtcaagtct
tcttttgatgagcaactgcaggacatgaagtcccacatgtcgcgactgttaagcaaaatg
gagcgcttgcaacaaaaggctgcagatgatttgaatatggaaaagtcacaagtgcgtttg
gaaaatgttgcaaaaattggctatcatttccgcgttactttgaaggacgattccgagttg
cgtaaaaataaaaattataaaattctcgatgtggtgaagggtggcgtacgttttaccaac
gataagttgaccgaatatagcgaggaatatggtacgctatgcgatcagtatgaggaacag
cagaaatcagttgtggaggagattataaaagtagctattggatatgcggcgccacttagt
tccttgaataatgaattggcacaactagattgtttggttagctttgctatggctgcattg
gcggcacccataccatatgtgcgtccaaaaatgataaaagagggctcgggtgtcttggag
cttaaggacttgcggcacccttgcttggaactccaggaacacgtgactttcatagccaat
agtgtagctttcaaaaaagatatttgcaatatgttcatcataaccggccccaacatgggc
ggcaaaagtacttatatacgatcggtgggcacggccgtattgatggcgcatgtgggcgct
tttgtgccctgcgctgaggccactataaatatgctggattcaatactgggacgtgtagga
gctagtgacaatatcgtcaaaggattgagtacattcatggtggagatgatcgagacttca
ggcattgtgcgcactgctaccgagaactcactggtaattatagacgagttaggacgtggt
acgtcgacctatgagggttgtggtatcgcctggtcgatagctgaacatttggcgaaagaa
acaaagtgtttcacactctttgcaacacatttccacgaaatcacgaatctggctgaatct
gtggaaaccgtgaaaaattgtcacatggccgcagtagcagatgctgaaaattttacgctc
ctatatcaagtacgtcctggtataatgcagaaaagttttggcatacaagtggcgcgttta
gcaaatttccccgagacggttgtgcataacgcgcaacgtatttatagagagttcgaagat
gaatatgctgataagcaaaatgaaacggacaaggaactgttggataaaatcgatgccgct
atggagcggctaacgacaacgggcaatgatattgacattgatgaggcagagttgagtgag
ttggtcgaaaagtttgccagtgatatcagacaattggatagcgagtatttccaagctgcg
ctatcagttgaggggaactag
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