Anastrepha obliqua (West Indian fruit fly): 129248381
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Entry
129248381 CDS
T09777
Name
(RefSeq) THO complex subunit 5
KO
K13174
THO complex subunit 5
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03013
Nucleocytoplasmic transport
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129248381
09122 Translation
03013 Nucleocytoplasmic transport
129248381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129248381
03041 Spliceosome [BR:
aoq03041
]
129248381
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129248381
Spliceosome [BR:
aoq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129248381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
129248381
NCBI-ProteinID:
XP_054743882
LinkDB
All DBs
Position
5:complement(52887075..52889214)
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AA seq
646 aa
AA seq
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MADSLHKNFETLRNIFEEVLKMKNSTAERDRGDELTEKRKYASLLFVLIKKVNRMVKYSL
RSGREDLHREKVRVDSNRLHLQNLLYEVNHLKREIRYCHKFKSQDEDIELVPENEEAGED
DKSLVLKDVSPLSGHAKHLARLERELNLRKQLSAQCKELLNTKQQVFRDIVLKTEKLTSF
APSLRTLLKATRPLQEALQVPMDREWKLQQLVQLLPQPLYLAYMNIHALELAKESDVCVV
VVGSEDDVRQLEIAAQTEVIKSGASSDTDELDVGSVTKKRKTHGGNSELLIDVLQEQRKR
VLQPHPLEVRFTIGNGAKSMEESIAVKLRYFKRLGFVTAATVVSLSDADQSFADVSLTQD
VLKYLHDDDMGDTIPVPGAEYELKHINMTAEECVDYLNCKEYGRPYRWLQAMCCIEVFNG
ANAIAPSGEVTRNEQPQLQKMIPDLIKSIQQLWTSRLNLIKQIRALVQKQIDLYLKEERL
PTTRPACSLVQWTALTYEEYLASSPSTDSEINNGNQLFYRAVVVRGSAKMECLVSISSKF
PSESPIWFICIYWNGQHNAINSAAVKSMEFWTNSLTQSMLQHPLALLATQLVRTMYSFDI
FLETEGPLYNPVEYHREKHYIKAFAKRIRARPYRYIEGGTVNTFKQ
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcagactctttgcataaaaatttcgaaacactacgcaatatctttgaagaagtgctc
aagatgaagaacagcaccgcagaacgtgatcgtggcgatgaattgaccgagaagcgcaag
tacgcatcgttgctgtttgtgttgatcaagaaagtaaatcgtatggttaagtatagctta
cggtctggacgtgaagacttgcaccgcgaaaaagtgcgcgtagacagcaatcgactgcat
ctacagaatttgctgtacgaggtcaaccatttgaaacgtgagatacgttattgtcacaaa
ttcaagagtcaagatgaggacatcgaattggtgccagagaacgaagaggcaggagaggac
gacaaatcgttagtgctcaaagatgtgtcgccattgtcagggcatgctaaacatttggca
cggctggaacgagaattgaatttgcgtaaacaattgtcggcacaatgcaaggaattactc
aatacaaagcaacaggtattcagagatatcgttttgaaaacggagaagcttacatcgttc
gcgccatccctgcgcactttgttaaaagccacacgacccctacaagaagcgctccaagtg
ccgatggatcgtgaatggaaattgcagcaactggtgcagcttttgcctcaacctctttat
ctagcatacatgaacatacacgctctagagttggcgaaagaaagtgatgtttgtgtagtt
gtggtgggtagtgaagatgatgtgcgtcaactggaaatagcagcacagacagaggtgatt
aagagtggggccagttcggacacggacgagctagacgtgggaagcgttacaaaaaaacgt
aaaacccatggcggtaacagtgaattgctaatagatgtattgcaagaacagaggaaacgc
gttttgcaacctcatccacttgaggtgcgcttcacaattggaaatggcgctaaaagtatg
gaagagtccatagctgttaaattgcgctactttaagcgcttgggctttgtcaccgcagca
acggttgtaagtttgagtgatgccgatcaaagtttcgcagacgtatcactaactcaagac
gtactcaaatatctgcatgacgatgacatgggtgatactatacccgtaccaggtgccgaa
tatgagctgaagcatataaatatgacagcagaagaatgtgtagattatttgaattgtaaa
gaatacggacgtccctaccgctggctacaggccatgtgttgcattgaggtttttaacgga
gctaatgccatagcgccatcaggtgaggttacgcgcaacgagcagccacagttacagaaa
atgatacctgatttaattaaatcaatacaacaactatggacctctcgtttgaatttgatc
aaacagatacgcgctttagtgcaaaaacaaatcgatttatatctcaaagaagaacgcttg
cccacaactcgtcccgcctgtagcctcgtacagtggacagcacttacctatgaagagtac
ttggcgtcatcgccttccactgatagtgaaattaacaatggtaatcaacttttttatcgc
gctgtggttgttcgcggctcagccaaaatggagtgtttagttagcataagtagcaaattt
ccatctgaaagtcctatttggttcatatgcatttactggaatggtcagcataatgccatt
aacagcgcggcagtaaagtcaatggagttctggacaaactcattgacgcagtctatgtta
cagcatccattggcgttgttggcgactcaacttgtacgtactatgtacagtttcgatata
ttcttggagacagaaggcccactttacaatccagtagaatatcatcgtgagaaacactat
ataaaggcattcgcaaaacgtatacgtgcgcgaccatatcgttatattgaaggcggtact
gttaatacatttaagcagtaa
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