Anastrepha obliqua (West Indian fruit fly): 129248551
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Entry
129248551 CDS
T09777
Name
(RefSeq) RNA-binding protein squid isoform X1
KO
K03102
squid
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
129248551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129248551
03041 Spliceosome [BR:
aoq03041
]
129248551
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129248551
Spliceosome [BR:
aoq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
129248551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_DEAH11
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
129248551
NCBI-ProteinID:
XP_054744118
LinkDB
All DBs
Position
1:86791235..86821651
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AA seq
326 aa
AA seq
DB search
MADSKNNDVEMNGEDFSKDVTTNENEKSTGTNGTNGNAEGQSNARDDDRKLFVGGLSWET
SERELREHFEAYGEIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKVHAAGEHIINNKKVD
PKKAKARHGKIFVGGLTNEISDDEIKTYFSQFGNIVDVELPFDKQKSQRKGFCFITFDSE
QVVNELLKTPKQKISGKEVDVKRATPKPDNQMIAMRGGRGGMRGGRGGFGRGGYPQWPGQ
GGYAPYGGYAGGYDAGYGDYYSGGYYNGYDYGYDYGYGGGYDGGYGGGSGGGGRGAGGPR
GGPKGAGSYPSGKQRGTGRQPRHQPY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggctgactccaagaacaatgatgttgagatgaacggtgaggatttctctaaagacgtc
accacaaatgaaaatgagaaaagtaccggcaccaatggtacaaatggaaacgccgagggt
caatcaaatgcacgggacgacgacagaaaactttttgttggtggtctcagctgggagacg
tcggagagggaactgcgcgaacatttcgaagcatacggtgaaattgacagcataaatgtt
aagacagatccccaaactggacgttctcgtggatttgcatttattgtatttaccaatact
gaagccatcgacaaggtgcacgctgccggtgaacacattatcaacaataagaaagtcgat
cccaagaaggccaaggcgcgtcatggcaaaatctttgttggcggtctcacgaatgaaatc
agcgatgatgagatcaaaacatacttcagtcaatttggcaatattgtagatgttgaattg
ccattcgataagcaaaagtcgcaacgtaagggtttttgcttcatcacgttcgactccgag
caggtcgttaatgaattgttaaagacacctaaacagaaaatttccggcaaggaagtggat
gtaaagcgtgcaacaccaaaaccagataaccaaatgattgctatgcgtggcggtcgcggt
ggtatgcgtggtggacgtggtggatttggtcgtggaggttatccacaatggcctggtcag
ggcggttatgcaccatatggcggatacgccggcggttatgatgctggttatggagactac
tacagcggtggctattacaatggctatgactatggatacgattacggctacggaggtggt
tatgatggcggctacggtggtggtagtggcggcggcggccgaggtgccggtggtccacgc
ggcggtccaaaaggtgccggtagttatccttcgggcaaacaaagagggacaggacgccag
cccaggcatcaaccttactaa
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