KEGG   Anastrepha obliqua (West Indian fruit fly): 129248554
Entry
129248554         CDS       T09777                                 
Name
(RefSeq) uncharacterized protein LOC129248554
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
aoq  Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018  RNA degradation
aoq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aoq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129248554
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129248554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoq03019]
    129248554
   03041 Spliceosome [BR:aoq03041]
    129248554
Messenger RNA biogenesis [BR:aoq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129248554
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     129248554
Spliceosome [BR:aoq03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    129248554
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 129248554
NCBI-ProteinID: XP_054744121
LinkDB
Position
5:complement(56400906..56401624)
AA seq 141 aa
MLPLTLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKDDAHAKSRNRSEIGKGRPGTGIQNQNLRGQIRPRYKNAQP
NGAKSVLRGQISHPSSNKNRK
NT seq 426 nt   +upstreamnt  +downstreamnt
atgctacccctaacgctgttaaaaacggctcaaagccatccaatgctagtcgaactcaaa
aatggtgaaacctataatgggcatttggtgagctgtgattcatggatgaacataaacctt
agagatgttatttgtacttccaaggacggagacagattctggcgaatgcccgaatgttat
atacggggcagtacaatcaaatacttacgaattccggatgaagttattgatatggttaag
gacgatgcacatgctaaatcaagaaaccgttccgaaattggtaaaggtcgaccaggcaca
ggaatccagaaccaaaatttgaggggccaaattcgaccgcgatataagaatgcccagccc
aatggcgcgaaaagtgttctgcgtgggcaaattagtcatcctagttctaataaaaatagg
aaataa

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