Anastrepha obliqua (West Indian fruit fly): 129249203
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Entry
129249203 CDS
T09777
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq04382
Cornified envelope formation
aoq04512
ECM-receptor interaction
aoq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129249203
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129249203
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129249203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoq04147
]
129249203
00536 Glycosaminoglycan binding proteins [BR:
aoq00536
]
129249203
Exosome [BR:
aoq04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129249203
Glycosaminoglycan binding proteins [BR:
aoq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129249203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129249203
NCBI-ProteinID:
XP_054744859
LinkDB
All DBs
Position
5:95592955..95661168
Genome browser
AA seq
1840 aa
AA seq
DB search
MKLPRGRQGLLGGGAQRRITNTYLWSLIFAIYLITFVRNDYSFADAKESNKNCNNTVCDC
KGLKGRPGAIGPKGYPGIEGPPGDVGPLGPFGRRGEFGDPGEYGEQGEKGHRGDIGELGL
SGRPGLTGFPGEDGPKGISGIDGCDGKPGLQGSPGFPGENGRRGPMGKPGPAGPTGDAGE
GGINSKGTKGNRGERGPDGVDGQPGYIGMKGYKGDIGYPGIEGSKGEIGIKGYKGDMAEP
ANLQLFAQGEQGEKGEPGDGEESEWNFGKVIKGYKGDSGPNGWPGTVGAPGEPGDVGPTG
MPGVRGDGGEPGERGKPGKPGEPGFPGEKGFKGAPGYNGLDGQDGFKGEHGDDGFDGIPG
VQGPAGPPGIYDPNLDKSFPGPQGPQGDIGPPGNPGLSGIPGGPGRRGPMGPPGPPGDIG
LDGAAGRRGDTIKGDDGDYGYLGPPGPMGAPGNPGLVGRPGQRGQPGLNLRGPKGFAGQV
GLAASDGYRGDRGEVGLTGDKGEPGDGLNIIGPPGSDGPPGIRGQPGLNGTPGWPGLVGD
KGVRGDDCGICPAGPRGMKGLQGDAGYAGLHGSRGYIGLTGERGPKGWPGNPGPRGRKGI
PGPPGANGDIGPPGPPGRPGYSYKIGNIQKPERGDQGDAGERGEQGATGERGVNGIPGLN
GAKGETGLRGDFGDIGRPGRDGSPGRPGYEGKPGADASTPKLYLVGNSGRDGRIGERGEA
GSEGLKGDKGEPNPGQIYDNKGEVGDKGYIGPAGEKGFKGEVGEEGIIGLPGDIGLPGPT
IEGPVGAKGWPGLTGDYGQHGAPGNVGLDGLPGLDGLPGLKGLRGEPGRYVLPGEMGPGG
NPGVRGEEGDIGFPGSPGPAGRPGVKGIKGSKGDDGAFGLQGLPGNKGQRGDYVVGYPGL
EGAPGRDGRTAPHGRKGQKGEIGMPGPVGVQGAKGSIGFPGRRGRIGDQGRSGEPGQTGS
PGWVGIPGEQGDRGDIGFDGRIGDMGPRGSFGNMGPKGQSGDFGPIGRAGVSGIPGRKGS
LGDRGFPGRPGAKGNAAYSGIKGEGGEPGLMGPRGYDGLPGMKGERGPEGDTPVALDGVP
GIKGETGIPGRFGLEGLAGLKGEQGEYGLIGLVGDKGERGDEGLVGYRGRNGLPGRKGAI
GLIGLTGAVGAKGDIGETGYPGIPGMIGDQGDVGLVGDAGAQGEQGDIGYPGRPGILLRG
FAQRGDKGEQGFQGEQGPIGEQGPDGAPGYVGLKGERGDIGFAGAPGTDGYAGLKGQTGD
KGYKGATGPIASFIENGDEGEPGYDGFPGRPGRLGPKGAPGEQGEYGENGLIGLPGISIG
GPKGQSGDAGYPGPPGRNGLYGTTGLKGERGNYGFQGERGEPGFAIRGRIGDVGDIGLMG
EAGFDGLKGEQGIQGFEGRPGPAGFRGLRGPQGDAGWSGIDGLEGLEGAKGERGFTYDFS
MAPPGDRGEPGLDGFKGEIGDIGEIGEIGSTGWRGLKGYQGEEGFMGAVGADGPQGERGM
PGLEGLPGLQGVPGPQGPAGPPAPPPPLPKSRGFVFVRHSQSVRIPECPANTNKLWEGFS
LAGNIGSSMAVGQDLGQSGSCMMRFTTMPYMFCDVNNVCNYAQNNDDSLWLSTAEPMPMN
MAPIQSFDLMKFISRCVVCETTTRIIALHSQSMSIPDCPNGWEEMWTGYSYLMTTTDNTG
GIGQNLVSPGSCLEDFRTNPVIECHGHGRCNYYDPLASFWLAVIEEYEQWVQPKQQTLKA
DQTSKVSRCTVCRRKNDSYIRRLSSVQVQATEFRRGPERVVPEPRVVPSPIRRPQQTPAR
NTYYRPNYRRPDPHGRPYNYAGQQYGGSRIRRPREDTYAP
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcccagaggccgtcaaggtctcttgggtggtggcgcccaaaggcgaataacg
aacacttatctgtggtcgctgatattcgcaatttatctgattaccttcgtgagaaatgac
tacagcttcgccgatgccaaggaatcgaacaaaaattgcaacaacacagtttgtgattgc
aaaggactgaaggggcgccctggtgctattggtccaaaaggttatccgggcattgagggt
ccacccggtgatgtgggtccgttggggccatttggtcgtcgtggtgaattcggcgatcct
ggagagtatggtgaacaaggcgaaaaaggacatcgaggtgacataggagagctggggcta
tctggtcggcctggtctaacgggattccctggtgaggatggacccaagggcattagtggc
attgatggttgcgatggcaaacccggtctgcagggttcacctggttttcctggtgaaaac
ggtcgccgtgggccaatgggcaagcctggcccagcaggtcccaccggtgatgccggcgaa
ggaggtatcaattccaagggtaccaaaggtaatcgtggtgaacgcggccctgatggtgta
gacggccaacctggctatattggcatgaagggctacaaaggtgatatcggttatcctggt
attgaaggctcaaaaggtgaaataggtataaagggttataagggagatatggcggaaccg
gcgaatctccagctttttgcacaaggtgaacagggcgagaagggtgaacctggcgatggc
gaggagagtgaatggaattttggcaaagtcataaaaggttataagggtgacagtggtcca
aatggctggccaggtactgttggtgctcctggtgaacctggcgatgtgggtccaacagga
atgcctggtgttcgtggtgacggtggagaaccgggtgagcgcggaaagcctggcaaacct
ggtgagcctggtttccctggtgaaaaaggttttaaaggtgcaccgggttataatggtctc
gatggccaagacggtttcaaaggtgaacatggtgatgatggattcgatgggattccaggt
gttcaaggtccagcaggcccgcctggtatttacgatcctaatttggataaatctttcccc
ggtcctcaaggtccacaaggtgacattggtccaccgggtaatccgggtttatctggcata
cctggcgggccaggccgccgtgggccaatgggtcctcccggcccccccggtgacataggc
ttggatggtgcagccggtcggcgtggagatactattaaaggtgatgacggtgattatggc
tatttaggaccgcctggccctatgggtgctccaggcaatcctggccttgtgggacgccct
ggtcaaagaggacaacctggcttaaatttgagaggacctaaaggattcgctgggcaggtg
ggtctagctgcaagtgatggttatcgcggagatcgtggtgaagttggactaactggagac
aaaggtgaacctggtgatggtttaaatatcattgggccacctggatctgacggcccacca
ggcataagaggccaacctggtctgaatggtacccccggctggccaggcttggttggtgac
aagggtgtgcgtggtgatgattgtggaatatgcccagctggcccacgtggtatgaaaggc
cttcagggtgatgccggatatgctggccttcacggctcgcgtggctacatcggcttgaca
ggtgaacgtggtcccaaaggttggcctggtaatcccggcccgaggggccgaaaaggaatt
ccaggtcctcctggcgccaatggtgatataggaccccctggtcctcctggccgtccaggt
tactcttataaaatcggcaacatccaaaaacctgagagaggtgaccaaggcgatgctggc
gaacggggcgaacaaggcgctactggtgagcgcggagtcaatggtatacccggcctgaac
ggtgcaaagggtgaaactggcctgagaggagattttggagatattggtcgtccaggtaga
gatggttcaccaggtaggcctggttacgaaggaaaacctggcgcagatgcttcaacgccc
aagctttatttagttggtaattctggaagagatggtcgcattggtgaacgcggtgaggca
ggcagtgaagggctaaaaggtgacaaaggtgaaccgaatcctggccaaatttatgataac
aaaggcgaagttggtgataaaggatatattggccccgctggggaaaaaggttttaagggc
gaagttggcgaagaaggcataataggattaccaggtgatattggcttacctggtccaacg
attgaaggtcctgtaggtgctaaaggatggcctggcttgaccggtgattatgggcaacac
ggtgctcctggaaatgtcggtcttgatggattacctggtctcgatggtttacctggtcta
aaaggactgcgcggtgaacctgggcgatatgttttgccaggtgaaatgggtccaggcgga
aatccaggcgttaggggtgaagaaggtgatattggattccctggttcccctggaccagct
ggaagacctggtgtcaaaggcattaaaggttcgaaaggtgatgatggagcatttgggttg
caaggtttgcctggtaataagggacaacgtggtgattatgtggtcggatatcctggcctt
gagggagctcctggcagagatggcagaaccgcaccgcatggacgcaagggtcaaaaaggt
gagattggcatgccaggaccggtaggagtgcagggtgccaagggtagcattggattccca
ggacgacgtggtcgtattggtgaccaaggtaggtctggtgaacctggtcaaaccggaagc
cctggctgggttggaattcctggcgaacaaggtgaccgcggtgatatcggttttgacgga
agaattggagacatggggccacgtggctcttttggaaacatgggaccaaaaggccagtct
ggcgattttggaccgattggtcgtgctggagtatccggtattcccggacgtaaaggttcg
ttgggtgatcgaggttttcccgggcgtcctggtgctaaaggcaatgcagcatatagtggc
attaaaggtgaaggcggtgaaccaggtctgatgggaccacgaggctatgatggattaccc
ggaatgaagggtgaacggggtcctgagggcgatacaccagtagctttagatggagtacct
ggcataaaaggagaaacgggtattcctggacgttttggcttggaaggcttagcaggtctc
aaaggcgaacaaggtgaatacggtttaatcgggcttgttggggataaaggcgaaagagga
gacgaaggattggttggttaccgtggacgtaatggcttacctggcaggaaaggtgctatt
ggacttataggattaactggtgctgttggggctaagggagatattggtgaaaccggctat
cccggtattcccggtatgataggtgatcaaggtgatgttggtctggtcggagatgcaggt
gctcaaggcgaacagggtgatataggttatccaggtcgacccggtatattgctacgaggt
ttcgctcagagaggtgataaaggcgaacaaggtttccaaggcgaacaaggtccgattggt
gagcaaggccctgatggggcacccggttatgtaggtcttaaaggtgaacgcggcgatatt
ggattcgctggtgcaccaggtacagatggatatgctggtctcaaaggacaaacaggagat
aaaggttataagggtgccactggacctattgcttcatttattgagaatggtgacgaaggt
gagccgggatatgatggcttccctggacgccctggacgtttgggtcctaagggagcccct
ggtgagcaaggcgaatatggagaaaatggcttaatcggattgccaggtatttctattggt
gggccaaaaggacagagtggtgatgcaggctatcctggacccccaggacgcaacggtttg
tacggcacaactggccttaaaggtgaacgaggcaattacggtttccaaggcgaacgcggt
gaacctggtttcgctattcgcggcagaattggtgacgttggtgatatcggtctgatggga
gaggcaggttttgatggactaaagggtgaacaaggtatacaaggatttgaaggacgtccc
ggtccagctggcttccgcggtctacgtggaccacagggtgatgccggttggagtggcatt
gatggtctagaaggtcttgagggcgccaagggtgaacgcggttttacctacgattttagt
atggccccacctggtgatcgtggtgagccaggccttgatggctttaaaggtgaaataggc
gacatcggtgagattggcgaaattggaagtacaggttggcgtggtcttaaaggttaccag
ggcgaagagggattcatgggtgctgtaggagctgatggtcctcaaggtgaacgaggtatg
cctggtctagaaggactacctggtttgcaaggagtaccaggaccacagggtccagctggt
ccacctgcaccaccaccaccactgccaaagagtcgcggatttgtatttgtgcgtcattca
caatcggtacgcatacccgagtgtccggcgaatacgaacaagctgtgggaaggcttctcg
cttgcaggcaacattggtagcagcatggcagttggacaagacctaggacaatccggttcc
tgcatgatgcgtttcacgacaatgccatacatgttctgcgacgtgaacaatgtgtgcaat
tacgcgcaaaataatgacgacagcttgtggctctccacggctgaacctatgccgatgaac
atggcgcccatacagtctttcgatctgatgaagttcatttcacgttgtgtagtctgcgaa
acgaccacgcgtatcattgcgctacacagccaaagcatgagtataccggactgtccgaat
ggttgggaagaaatgtggaccggttacagttatttgatgactacaactgataacacaggt
ggtattggtcagaatttagtttcgcccggttcttgcttggaagacttccgcaccaatccg
gtcattgagtgtcatggtcatggtcgctgcaattattatgatccactcgcctccttctgg
ttggctgtgattgaagaatacgaacaatgggtgcagccgaaacagcaaacactaaaggcc
gaccaaaccagcaaagtcagccgctgcaccgtttgccggcgcaagaacgattcatatatc
cgacgcctctcgtcggtgcaagtgcaggctactgagttccgtcgcggtcctgagcgtgtt
gtgcccgaaccacgagtcgtgccatcgccaatacggcgaccccaacaaacgccagcgagg
aacacctactatcgcccgaactaccgacgtcccgacccgcacggtcgcccctacaactat
gccgggcagcagtatggcggcagtcgcatacggcgtccacgtgaagacacatacgcgcca
taa
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