Anastrepha obliqua (West Indian fruit fly): 129249305
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Entry
129249305 CDS
T09777
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129249305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129249305
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129249305
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
129249305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129249305
NCBI-ProteinID:
XP_054745007
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All DBs
Position
5:complement(12170960..12171778)
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AA seq
249 aa
AA seq
DB search
MSSFELLSEQGLRLDGRRPHELRCIKCKLGVFEQPDGSAYLEQGNTKVLAAVYGPHQAQM
KKLDLNEVVINCQYSMATFSTAERKNRPRGDRKSQEITLYLRQALCAAIKTELYPRSQID
VYVEVLQADGANYAVALNAATLALVDAGICLKEYVVACTASLSKNNIPLTDVSHVEEVSG
GPTLTVASLPTSNKIAFMEMSQRFHLDNLPSVMEQALNGCREIQAIMEKEVRKHLMQMGS
AGDWSNIAK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttttgagttacttagtgagcagggattgcgactagatggtagacggccgcat
gagcttcgttgcattaaatgtaagttgggtgtatttgagcaacccgatggcagtgcatac
ttggagcagggcaatacaaaggtgcttgcagctgtgtacggtccgcatcaggcacaaatg
aaaaaacttgatcttaatgaagtggtaattaattgtcaatatagtatggcgacattttcg
accgcagaacgtaaaaacagaccacgtggcgaccgaaaatcacaagaaatcacactatat
ctacgacaagcactttgtgctgccatcaagaccgaactgtatccacgctcacaaatcgat
gtatatgtggaagttttacaagcagatggtgcaaattatgcagttgcacttaatgccgct
acattagccttggtggatgcaggtatatgccttaaagaatatgttgtggcttgtaccgct
tcgttaagtaaaaataatataccacttacggatgtttcgcatgtcgaggaagtttcggga
ggaccaacattaacggtcgcatctttgccaacatcaaataaaattgcatttatggaaatg
tcgcaacgtttccaccttgacaatttgccatcagttatggagcaggcgttgaatggttgt
cgagaaatacaagctataatggaaaaagaagtgcgaaagcatctgatgcaaatgggttca
gctggagactggagtaatattgcaaaataa
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