Anastrepha obliqua (West Indian fruit fly): 129249399
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Entry
129249399 CDS
T09777
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129249399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129249399
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129249399
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129249399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
Cas3-like_C_2
nSTAND_NTPase5
T2SSE
SRP54
TsaE
Motif
Other DBs
NCBI-GeneID:
129249399
NCBI-ProteinID:
XP_054745173
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All DBs
Position
5:47748753..47752358
Genome browser
AA seq
890 aa
AA seq
DB search
MSKNKKRAASSSSEELDSEEEDRLKDLKERDEFAERLKKRDEGKVRKVLESSASRKAIEE
AAKRLKLEHEDRDKILPQLRVQSRRKYLEKRKEDKVAELEADILDDEYLFDDKILSSRER
EEREYKKQLLQIAKEHERARELERIQRYHIPQNLKKGEKEEYVEVDELEKQPNSEQKKWE
VEQLASARFQFGSKDAKMKEEYELLLEDQIEFIQALTMDGSKDSSSKKDEISEADRKRMT
IEETQKSLPVYPFKDDLIEAVKEHQVLIIEGETGSGKTTQIPQYLVEAGFTKDKKKIGCT
QPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGTLHREFLSEPDL
ASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSKFFDDAPIFR
IPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLQDR
VKRLGSKIRELVIIPVYANLPSDMQSKIFEPTPPNARKVVLATNIAETSLTIDNIIYVID
PGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNT
VPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKL
GRRMAEFPVDPMMGKMLLASEKYKCSEELVSIAAMLSVNSAIFYRPKDKIIHADTARKNF
NHMHGDHLSLLQVYNQWVDTDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVS
CLPETVNVRKAVTAGYFYHVAKLSKNGNYKTIKHNQTVLIHPNSSLFEELPRWLLYHELV
FTTKEYMRQVIEIDSKWLLEVAPHYYKAKELEDSTNKKMPKVTGRAIMTQ
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaacaagaaaagggcagctagctccagttccgaagaattggatagtgaggaa
gaagacaggttaaaagaccttaaagaacgcgatgaattcgctgagcgtctgaagaagcgg
gatgaaggtaaggtgcgtaaggtactggaatccagtgccagtcgaaaagctattgaagaa
gctgcaaaaaggctgaagcttgaacatgaagatcgggacaaaattctgcctcagcttcga
gtgcagtctcgtcggaagtacttagagaaacgaaaggaggacaaagtagctgaactcgag
gcggatattttggatgacgaatatttatttgacgacaaaattctaagttcacgtgaacgg
gaggaacgcgaatacaaaaagcagttgctccaaatagcgaaagaacatgaacgtgcgcga
gagcttgagagaattcagcggtatcatattcctcaaaacttaaaaaaaggagaaaaagag
gagtatgtggaggtggatgaactggaaaaacagcccaattcggagcagaaaaaatgggaa
gttgaacagttagcatctgcacggtttcaatttgggtccaaagatgccaagatgaaagaa
gagtatgaactgttgctggaagatcaaattgagttcatacaagcgcttacaatggacggt
tccaaagatagttcgtcaaaaaaagatgaaatatctgaagcagatcgaaagcggatgaca
atagaggaaacacaaaaatcgttaccagtatatccatttaaagatgatttaatagaggct
gtaaaggaacatcaggttttaataattgagggagaaactggttctggtaaaacaacgcaa
atccctcaatacttggtagaagctggctttaccaaagataagaagaaaattgggtgtact
cagccgagacgtgtagccgcgatgtctgtagcagcgcgtgttgctgaagaaatgggtgtt
aagttaggaaatgaagttggatacagcatccgtttcgaagattgcacttcagaacgaaca
gtactaaagtacatgactgatggtacgttacatagggagtttctatcagaaccggatctg
gcctcttacagcgttatgataattgatgaagcccatgaacgcacattgcatacagacata
ttgtttggccttgtgaaagatatagcgcgttttcgaccagaattaaagctgctcatttcc
agcgcgacattagatgctgaaaaattttcaaagttctttgatgatgcgcccatatttcgt
atacctgggcgtagatatccggtggatatattttatacgaaagctccagaagcggattac
attgacgcctgctgtgtttcggttttacaaatacatgctactcaacccctgggtgatata
ttggtatttcttactggtcaagatgagatagaaacatgccaagaagttttacaggatcgc
gtaaagcgactcgggtctaaaatacgtgaattggtcatcataccagtgtacgcaaatctg
cctagtgatatgcaatccaaaatttttgaacctacaccgccgaacgccagaaaagttgtg
ttagcaacaaacatagcggaaacttcgttaactattgataatataatatatgtgatcgat
cccggatttgcaaagcaaaataatttcaattctcgaacgggtatggaatcattgatggtt
gtaccaatttccaaagcgtcagcaaaccaacgagcaggacgtgctgggcgaactgctcct
ggtaaatgtttccgtctttacaccgcttgggcttataaacatgaattggaagataacact
gtgcctgaaattcagcgcataaacctcgggaacgcagtgctaatgctgaaagcgctcggt
atcaatgatctcatacacttcgactttttagatccaccccctcacgagacgctagtttta
gctctggaacagctttatgcactgggcgccttgaatcatcatggcgaattgacaaagtta
ggtagacgcatggcagagtttccagttgatcctatgatgggaaaaatgctattggcgagc
gaaaagtataagtgctccgaagaattggtgtccatagcagcaatgttatctgtgaacagc
gccattttttaccggccaaaagataaaataatacacgccgacactgctcgaaagaatttt
aatcacatgcatggcgatcatctaagtttgttgcaggtttacaatcaatgggttgacacc
gattatagcacacaatggtgttacgaaaatttcatacaatatcgttccatgaaacgcgct
cgtgatgttcgcgaacaattggtgggcttaatgcagcgtgttgagatcgacatggtttct
tgtttgcccgagacggttaacgtaagaaaggccgtcacagccgggtatttttaccatgta
gcaaaattgtcgaaaaatggcaattataagacaataaaacataatcaaactgttttgatt
caccccaattcgtcgctttttgaggagctgcccaggtggctgctatatcatgaacttgtc
tttacaacgaaagagtatatgcgacaagtgattgaaatcgatagcaagtggctgctggag
gttgcgccacattactataaagcaaaggaacttgaagattcgactaataaaaagatgccc
aaggttacgggccgtgcaatcatgactcaataa
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