Anastrepha obliqua (West Indian fruit fly): 129249443
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Entry
129249443 CDS
T09777
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129249443
03036 Chromosome and associated proteins [BR:
aoq03036
]
129249443
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129249443
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
129249443
SLIK complex
129249443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
SLIDE
Motif
Other DBs
NCBI-GeneID:
129249443
NCBI-ProteinID:
XP_054745235
LinkDB
All DBs
Position
5:40730790..40754004
Genome browser
AA seq
2085 aa
AA seq
DB search
MNQEHNESLNSIGPEENDDNQEEQNASGSGSLSSSGSDSDSDSSTSSSNSSRRHSSADHE
SHDSDQSYDSGDNAQHGQTQQQRKARRVTPTESGPTADGFPPTAAAAQEDTKTNGYSDDN
ESDSDSNSDTNSDSNEEEDEEHRGEEIEKDAAKSTRNLTNNTSATSNTTTTTSTDNNTSN
TTNDGDEDSQDEDASVEDECNGNESTVHDGQDKRRAGKMAATKSCSKMVSQSSLATKALS
KNRTQNEGDDAVDDDDAEASESSADKSSSSAAQSPTCSSSSSSEDDEDDYQPKRSTRTAR
KTQAVSSNEKATKKAAKKRKKQNWDSDETDESEADSGLSAPQRRKANTKAGHAKASQRRG
KKASYSSDESDDGEEDSKRFGTRRTAAAVSYKEASEDEKTDSEDLLEVEYDESQAAAAEE
EEKCETIERILAKRQGRKGCTGNPTTIYAIEEQGADPNDGVDENDLANTETQYLIKWKGW
SYIHNTWESETTLREQKVKGMKKLDNFVKKEQDIEYWRRYAGPEDIDYFECQLELQNDLL
KSYNNVDRIIARNEKPDGMSEYLCKWQSLPYAEATWEDGVLVQRKWQRCVEQYEEREISK
CTPSRHCKVLKYRPKFYKIREQPDFLTEGLTLRDYQMDGLNWLLHSWSKENSVILADEMG
LGKTIQTICFLYSLFKVHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDVKSRE
MIRQYEWQFDGSKRLKFNCILTTYEIVLKDKLFLGTLQWAALLVDEAHRLKNDDSLLYKS
LKEFETNHRLLITGTPLQNSLKELWALLHFIMPDRFVTWEDFELEHGNAADKGYTKLHQQ
LEPYILRRVKKDVEKSLPAKVEQILRVEMTLLQKQYYKWILTKNFDALRKGKKGSTSTFL
NIVIELKKCCNHAALIRPSEFELIGLQQEEALQTLLKGSGKLVLLDKLLCRLKETGHRVL
IFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGG
LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ
KMVLDHLVIQRMDTTGRTVLDKSGASSSNATPFNKDDLSAILKFGAEELFKDEQENDDEL
VCDIDEILRRAETRNEDPEMPGDDLLSAFKVASIATFEEEPSEAAKDDDNLGGEEEDTKD
WDDIIPEDFRKIVEDQERAKEMEDLYLPPRRKTAVANQDSNAPGKRTGKKSQADESGADS
EYEVGSDASGEDGRPKKRGRPTNKEKIIGFSDAEIRRFIKSYKKFPAPLERLEAIACDAE
LQEKPLTELKRIGEMLHDRCVQFLEEHKDDPPATPKIAADDTVAAKQRRTRATYSVKLGG
VSFNAKTLLSCEEELKPLNDIVPNASSERLSWQLNIKTRPANFDTDWGVEEDSKLLCGIY
QYGIGSWEQMKMDPSLKLTEKILSNDARKPQGKHLQSRAEYLLKIIKKNVELKKGVQRKQ
RKPRKPREAKISGTAVGGTAVSVTPERKPRNISETHIGDDASQSAHEGAERKPRSRDSTS
KAETAEHDVIANTTESTDATSATAMKKKSKRSSGKEGKTGARTKKSNASESAANNKPMHF
TANNEPRALEVLGDLDPTIFNECKEKMRPVKKALIALDRPDTSLSNQEQVRHTRECLLSI
GRQIDACLEAYKEPEKKEWRSNLWYFVSKFTEFDAKKLFKLYKHTLKSTEETGGVIGGAS
GSGGASVPSSTEKSAKANSQSPTKRTRSDAKVQHENGITAVSEKKKKKREKDKDKTKEKD
KIRDKTEKHIGAAGTTASTDKSKRLSGLESPMKRKRDENDVGGVNPIDGKGTPYKRQNMN
AVNRSRDRNDERKKIYGGDGSGPPVRGSGTSCIPPVGGGDRRNSMNSPSTPNNRGIHGVN
ARLPSNIAGTPAGVASSGTYSTPAGAGEARNMSSPYMDGNDRWGHGRDRYGNSDYKRDRY
ENYGSRNSSGGGYHRDHRDRDRDRRPDKRRYHPAHVPPPPLSYTGYHMPPNYYMGNGGLP
PGAAPPHGQYRGDTRYASAGDWPRDSRMDFPPDYRRGDYDRRPQT
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaacacaatgaatccctcaatagtataggaccagaagaaaatgatgataat
caagaagaacaaaacgcgtctggcagtggtagcctaagttcttcaggatctgattctgat
tcagacagctcaacgtcatcttcaaactcgagccgaagacatagttctgctgatcatgag
tcacatgacagcgaccaaagctatgatagcggtgacaatgcccagcatggtcaaacccaa
caacaaagaaaagcccgcagagttacaccgaccgaaagtgggccaacagcagatggcttt
ccgcccacagctgcagcagctcaagaggatacaaaaactaacgggtactccgatgacaac
gaatcagacagcgattccaattcggacactaattcagacagcaatgaagaagaagatgag
gaacatcgtggtgaagaaattgagaaagatgctgcaaaatccacccgcaatcttactaac
aacacatcagccacatctaatacaaccacaactacatctacggataacaatacctcaaat
acaacaaatgatggggatgaagattcccaagatgaagatgcaagtgttgaggatgagtgt
aatggaaacgagagcacagttcatgacggacaggacaagagaagggccggtaaaatggca
gcgacgaaatcgtgttcaaagatggtatctcagtcatccttagctacaaaagctttgtct
aaaaatagaactcaaaatgaaggcgatgatgccgttgatgatgatgacgccgaagcatca
gaatcatctgctgataaaagttcttcgtcagccgctcagtcaccaacttgcagcagtagc
agtagtagcgaagacgatgaggatgactaccagcctaaacgtagcacgcgcacagcaaga
aagacgcaagctgtatcatcaaacgagaaggccacaaaaaaggcagccaaaaaaaggaag
aagcaaaattgggactcagatgaaactgacgaaagtgaagcggatagcggtttatcagca
ccacaaagacgaaaagcgaacacaaaggctggccatgccaaagcatcacaacgtcgcggt
aaaaaggcttcctattctagcgacgaaagtgatgatggtgaggaagacagcaaacggttt
ggaacacgtcgaactgctgcagcggtcagctataaagaagcttctgaagacgagaaaaca
gattcagaagatttgttagaggttgaatatgatgagagtcaagcggcagcagctgaagag
gaggagaaatgtgagacaatcgagcgtatattagcgaaacgtcaaggtcgcaaaggctgt
actggaaatccaacaacaatttatgccatagaggaacagggggccgatcctaatgatggg
gtcgatgagaatgatctggcgaatactgaaacacagtatttgattaaatggaaaggatgg
tcgtatatacataacacatgggagtcagagacaactttacgagagcaaaaggtcaaaggc
atgaaaaaacttgataacttcgttaaaaaggaacaagatattgaatattggcgtcgttat
gccggtcctgaagatatcgactactttgaatgccaattagaattacaaaacgatttgctt
aagtcgtacaataatgtggatcgcattatagcgcgtaatgagaagccggacggtatgtca
gaatatctctgcaaatggcaatcgctaccatatgcagaagccacttgggaagatggtgta
ttagttcaacgcaaatggcaacgttgcgtagaacaatatgaagagcgtgaaatatccaag
tgtacaccgtcacggcattgtaaggtgctcaagtatcgtccgaaattctataaaatccgc
gaacaacccgattttttgaccgaaggtttaactttgcgtgattatcaaatggacggttta
aattggttattacactcatggagcaaggagaactccgtcatacttgccgatgaaatgggt
cttggtaaaaccatacaaaccatctgctttttgtattctttatttaaagttcatcactta
tatgggccatttctgtgcgtagtaccgttaagtactatgacagcgtggcaacgagaattt
gatctctgggcgcccgatatgaatgtggtgacatatttgggtgatgtgaaatcacgggaa
atgatacgccaatatgagtggcaatttgatggatcgaaaagactgaaattcaattgcatt
ctaaccacatatgagattgtgctgaaggataagcttttcctcggcaccttgcaatgggct
gcattgctagttgacgaagcgcatcgcttaaaaaacgacgactctttgctatataaatct
ctgaaagaatttgaaacaaatcatcgtctactaatcacaggcacaccattgcaaaattcc
ctcaaggaactatgggctttgcttcacttcattatgcccgatcgatttgttacttgggaa
gattttgaactagaacatgggaatgctgcagataaagggtatactaaattgcatcagcag
cttgaaccatatattttacgtcgcgttaaaaaggatgtcgagaagtcgttgccagcaaag
gtagaacaaatattgcgagtcgaaatgacgttacttcaaaaacaatactacaagtggatt
ttgacgaaaaacttcgatgccttgcgcaaaggtaaaaagggttctacgtcaacattctta
aatattgtcattgaattgaagaaatgttgcaaccatgctgcacttatacggccatcagag
ttcgaattgataggtctgcagcaggaggaggcactgcagacgttattgaaagggtccgga
aaattggtacttttagataagttgttgtgccgtctgaaagagaccggccatcgtgtgttg
attttctcgcagatggtacgtatgctggacgtgcttgctgattacttgcaaaaacgtcat
tttcctttccaacgtctcgatggtagcataaagggtgaaatgcgacgtcaagccttagac
catttcaatgcggaaggcagtcaggacttttgttttctattgtctacacgtgctggtgga
ttgggtattaatttggcaacggcagataccgttataatctttgattcggattggaatccc
caaaatgatttgcaggcacaagcacgtgcacatcggattggccagaaaaatcaagtaaat
atttatcggttggtaacggcgcgttctgttgaagagcaaattgtggagcgagcgaaacag
aaaatggtacttgatcatcttgtcatacagcgtatggatacgacaggtcgtacagtttta
gataaaagtggtgcaagttcatcaaatgctacacccttcaataaagatgatttgtcagca
attttgaagtttggcgccgaggaattattcaaagacgaacaggaaaatgatgatgaattg
gtatgcgatatcgatgaaatcttacgccgtgcagaaactcgcaatgaagatccagaaatg
cctggagacgatttgttatctgcatttaaggttgccagtatagcgacctttgaggaggaa
cctagtgaagcggctaaagacgatgacaatttgggtggtgaggaagaagataccaaagac
tgggatgatataatacccgaggattttcgaaagatagtcgaagaccaagaacgcgccaaa
gagatggaagacttgtatttaccaccacggcgaaagaccgcagtagccaatcaggactcc
aacgcgccgggtaaacgtaccgggaagaagagccaggcagacgaatcaggcgcggactcg
gagtatgaagttggctcggatgccagcggagaagatggtcggccgaagaagcgtggtcgt
cctaccaacaaggagaagataattggcttttctgatgctgaaatacgacgctttattaag
tcatacaagaaatttccagcaccgctcgagcgcctagaagcgattgcttgtgatgctgag
ctgcaagagaagccattgacagaattaaagaggattggcgaaatgttacacgatcgctgt
gtacaattcctcgaagaacacaaagatgacccaccagctacacctaaaattgctgccgac
gacacggtagcggcgaagcagagacgtactcgtgcaacatattccgtaaaattgggcggt
gtttcatttaatgccaaaacgctgctatcttgtgaagaggaactaaagccactcaacgat
attgtaccaaatgcaagtagtgagcggcttagttggcaattaaatattaaaactcgacct
gcgaatttcgacacggactggggtgttgaggaggactccaaattgctatgtggtatttat
caatatggcattggttcatgggagcaaatgaaaatggatccaagtctgaagttgacagag
aaaatcctctccaacgatgcacgaaagccacaaggaaagcatttgcaatcacgggcggaa
tacttactaaaaattattaaaaagaatgtagaactgaaaaaaggagtccaacgcaagcaa
cgcaaaccgcgtaagccgcgcgaggcaaaaattagcggaactgctgtcggaggtacggct
gtatcagtgacacccgaacgaaaacccagaaacatatccgagacccacattggcgatgac
gcatcacaatccgctcacgaaggtgcggaacgtaagccacgctcacgcgatagtacatca
aaagctgaaactgctgagcatgatgttatcgctaatactacagagtctacagatgctacc
tcagctacagctatgaagaaaaaatctaaacgtagctctggaaaggaaggcaaaactggt
gctcgtacgaagaaatcaaatgcttctgaatcggcggcgaataacaagcccatgcatttt
acagcaaataatgagccacgtgcacttgaagtgcttggtgatcttgatcctactatattt
aacgagtgcaaagagaaaatgcgaccggttaaaaaagcgttaattgcgcttgaccggcca
gacacaagcctttccaatcaagaacaagtgcggcacacacgcgaatgcctactatccatt
gggcgtcaaatcgatgcttgtttagaagcatataaagagcccgaaaagaaagagtggcgc
agtaatttgtggtatttcgtttcgaaatttacagagttcgatgcgaaaaaattgtttaag
ttgtacaagcacacgttgaagagtacagaggaaacagggggcgtaattggtggtgctagt
gggagtggtggtgcgagtgttccgagctcaacagagaaaagtgccaaggcgaattcccaa
tcgcccacaaaacgtacacgcagcgatgccaaggtgcagcatgaaaatggcattacagct
gttagtgagaaaaagaagaagaaaagggagaaagataaggataagacaaaagaaaaagat
aaaattcgtgataaaaccgaaaaacatatcggtgcagctggaactacagcgagtacggat
aaatcaaaacggttgtcaggcttagaatcgcccatgaagaggaagcgggatgaaaatgac
gtaggtggtgtaaatcccatcgacggaaaaggcacaccgtacaaacgccagaatatgaac
gctgttaacagaagccgtgatcgcaacgatgagcgcaagaaaatttacggtggtgatggc
tctggtcctcctgttcgtggaagcggaaccagttgcataccgcctgttggtggcggcgat
cgacgaaattctatgaattcaccgtcaactccaaacaatcgtggcatccatggtgttaac
gcacgactaccgtcgaatatcgcgggtacgcctgctggagttgcaagcagtggaacttat
agcacgcctgctggtgcaggtgaagcgcgtaacatgtcatcaccttacatggatggcaat
gaccggtggggtcatggacgtgatagatacggtaattcggattacaaacgagatcgttac
gaaaattacggtagtcgaaatagcagcggtggtggttatcatcgggatcatcgcgatcgg
gatagagatcggagacccgataaaagacgctatcatccagctcatgtgccaccaccccca
ctttcgtataccggttatcacatgcctcccaactattacatgggcaatgggggcttgcct
cctggagcagcaccgccacatggccaatatcgcggagatacacgctatgcatctgcaggt
gattggccgcgcgacagtcgcatggatttcccgccagattatcgaagaggggactacgat
cgacggccgcaaacataa
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integrated database retrieval system
