Anastrepha obliqua (West Indian fruit fly): 129250188
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Entry
129250188 CDS
T09777
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129250188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129250188
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129250188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
129250188
NCBI-ProteinID:
XP_054745800
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Position
1:complement(38845789..38848532)
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AA seq
661 aa
AA seq
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MADDTNEDSWLYGTSNPDSTTNEDNEATVGIDKEAPLLSQKSENEATALVGRGDALAAKE
CESRDEEEPFGEFEDPAQEMEEDEEAAAAAASTAADTTDAGEENGNQMQQAKVTEDGEGN
LDDEDDSDDDINVVIGDIKPAPSTYNIKQRANLLAGPPGSGQEKSKSVAPGGKFSVEDFE
VVGTINGVPAHEFSIDSLEDKPWRKPGADITDYFNYGFNEETWRAYCERQKRFRIQESGV
GLASLTQNINQSAERQHDGAVSAGQISNMAPGLLANDQMQLPPPGILPPPQGVHHGPPRM
GMGMPRGPRPISTTNSKENPIQVMTAECREYSRPGSVSQLSTNFGAPPPADEPYFPEPET
FDYGYEPTQESQWNNENPGWVPSGIKELTPGPGMVPPPATGMSGPPGVPPMGVPPPQIGG
PPPQMRQHPPIMPVMPPPNMAMGPPPPGMGMMIGPAGGPPMRMPMGPPRLMGPHGGGPPN
PLHMDRERHERERERDRDYERNERRERDRDRERERDRDRDRETERERERERERERERPRR
ERSRSREKTRRRSKSRDRERDREREREREPDRERERDRSEKIDDTDRTADEDRERRRRER
DRDRERERSRRERSRSRDKTRRRSKSREKERDRSGKTASTSSSTSRSEKKKSHRKDKEED
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatacaaatgaagatagctggttgtatggcacatcgaatcctgattcaaca
acaaatgaagataatgaagctactgttggcatagataaggaggcgccgctattgtctcag
aagtctgaaaatgaagcgactgccttggtaggaagaggtgacgcgttggcagcgaaagag
tgtgaatcgcgcgatgaggaagaaccgtttggtgagtttgaagatccagctcaagaaatg
gaagaggatgaagaagccgcggctgctgctgctagcactgcagcagatactactgacgca
ggggaagaaaatggcaatcaaatgcagcaggcaaaagtgacagaagatggcgaggggaac
ttagatgatgaagatgactcggatgatgatatcaatgttgtaattggtgatataaaacct
gcacctagtacatataatattaaacaacgcgcaaatttattggctggtcctcctggatct
ggccaagaaaaatccaagtctgttgcaccgggtggtaaatttagtgttgaagattttgaa
gttgtcggcaccataaatggtgtaccagcacatgaatttagtatcgattccttggaggat
aaaccgtggcgtaagccaggtgctgatattactgattatttcaattatgggttcaatgag
gagacatggcgtgcctactgcgagcgtcaaaaacgatttcgcatacaggaaagtggtgtc
ggtttggctagcttaacacaaaatattaatcagtccgctgagcgtcagcatgatggagct
gtaagtgctgggcaaattagcaacatggcacctggactgttagcaaacgatcaaatgcaa
ctgccacctcctggaattttaccaccgccgcagggtgtacaccacggcccaccgcgtatg
ggtatgggcatgccacgaggacctcgaccgatcagtactacaaatagtaaggagaaccct
atccaagtaatgacggccgaatgccgtgaatattctcgaccaggctcggtatcacaatta
tcaacgaattttggtgcaccaccgcccgcagatgagccatacttcccagaacctgaaaca
tttgattacggctatgaaccgacgcaagagtcacaatggaacaatgaaaatccggggtgg
gttccatctggcataaaagaattaactcccggtcctggaatggtaccaccgccagcaacc
ggaatgtccggaccacctggtgttccaccgatgggcgtgcctcccccacagattggtgga
ccgcctccacagatgcgtcaacatccgcccataatgcctgttatgcctccgccaaacatg
gctatgggtcctccaccacctggtatgggtatgatgattggtcccgccggaggacctcca
atgagaatgcctatgggaccgcctcgcctgatgggtccacatggaggtggaccaccaaac
ccattacatatggatcgcgagcgccatgagcgtgagcgtgaaagagaccgtgactatgaa
cggaatgagcgcagagagcgggatagagatcgtgaacgagaacgtgatcgtgatcgagat
cgtgaaactgaaagagagcgggaacgagagagagaaagggaacgcgaaagaccacgacgc
gaacgttcacgtagtcgtgaaaaaaccagacgacgttccaagtcgcgtgaccgtgagcgc
gatagagaacgtgaacgcgaacgagaaccagatcgtgaaagagagcgagacagaagtgaa
aaaattgacgacactgaccgtacggcagatgaggatcgtgaacgaagaaggcgtgagcgt
gatcgtgaccgcgaacgtgaaagatcgcggcgagagcgatcgcgtagtcgtgacaaaaca
cgtcggcgttctaaatctcgcgaaaaggaacgtgatcgaagtggcaagacagctagtacg
tcttcctcaacaagtcgtagcgagaagaaaaaatctcatcgcaaagacaaggaagaagac
gagtga
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