Anastrepha obliqua (West Indian fruit fly): 129250566
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Entry
129250566 CDS
T09777
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129250566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129250566
03009 Ribosome biogenesis [BR:
aoq03009
]
129250566
Enzymes [BR:
aoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129250566
Spliceosome [BR:
aoq03041
]
Complex A
U1 snRNP components
U1 related factors
129250566
Complex B
129250566
Ribosome biogenesis [BR:
aoq03009
]
Eukaryotic type
Pre-60S particles
Helicases
129250566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
129250566
NCBI-ProteinID:
XP_054746161
LinkDB
All DBs
Position
1:complement(90171056..90180663)
Genome browser
AA seq
758 aa
AA seq
DB search
MLKILVQSLAKISCENRAPSHVAAVACVKNLLIFPSAVINPATSTISRRHFLFSSTNRGP
VNFAFSKYQLFTGRETIAQAEFKKSSNLGGITSSSDSFYRYFHKTSENLLEAEATPVEKQ
KFTATKRDQDSFTKTSIYIDPDEMAPHDRNFGTRGGRGGDDRQARHGGSAGGMRHGGGGG
GVGGGDFHGVRNGRIDKNRGGGRGGNFGGGSGFGGGAGGYGGGNSRGGTQDITLGSVDFS
NLAPFKKNFYQEHPIVANRSPYEVQRFRDEHEITIRGNAPNPIQDFSEAYFPDYVMKEIR
RQGYKAPTAIQAQGWPIAMSGSNFVGIAQTGSGKTLGYILPAIVHINNQKPLERGDGPIA
LVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLID
FLSMNATNLKRCTYLVLDEADRMLDMGFEPQIRKILSQIRPDRQTLMWSATWPKEVKQLA
EDFLGNYIQINIGSLELSANHNIRQVIDVCEEHDKEDKLKSLLSEIYDTSENPGKIIIFV
ETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDYVLREFRSGKSNILVATDVAARGLDVD
GIKYVINFDYPQSSEDYIHRIGRTGRSNTKGTSYAFFTKNNAKQSRALVDVLREANQEIN
PALEGMARSNRGFDGGRSRYGGGGGNSRFNGTFRKGAIGGGGNGGRGYGGGYGGNSGGGY
GGGRSNGYSNTNSGENGYGNRNAANSSSGGGRQHTRFD
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaatattggttcaaagtttagcgaaaatctcgtgtgaaaaccgagcgccgtca
catgtggctgcagtggcgtgtgtaaaaaatttattgatttttccatcggccgttattaac
ccagccacgagtactatatcacgacgccattttcttttttcttcaaccaacagaggaccg
gtgaattttgctttttccaagtatcaactatttacaggcagagaaactatcgctcaagca
gagtttaagaaatctagtaatctcggtggaataacaagtagctctgatagcttctatagg
tattttcacaaaacaagcgaaaatttgttggaagcagaagcgacgcctgtggaaaagcaa
aaatttacggcaacaaaaagagatcaggactcatttacaaaaacatcaatatatatagat
ccagacgaaatggcacctcacgataggaattttggtactcgtggtggacgtggcggtgat
gaccgtcaggccagacatggcggcagtgctggtggcatgcgtcatggcggcggcggtggt
ggtgttggtggtggtgacttccatggcgtacgcaatggacgtattgacaagaaccgtggt
ggcggccgtggcggtaattttggtggcggcagtggcttcggcggcggagctggtgggtac
ggtggtggcaatagccgcggtggcacacaggacatcacacttggctctgtcgatttctca
aatctggcacccttcaagaagaatttctaccaagaacacccaattgtagccaatcgttcg
ccctatgaagtacagcgcttccgtgatgagcatgagattaccattcgtggaaatgcacca
aacccaattcaggacttcagtgaagcgtattttccggattatgttatgaaggagatacgt
cgacaaggatacaaggcacctacagctatccaagctcaaggttggccaatcgctatgagc
ggttctaattttgttggtattgctcagactggatcaggaaaaacactcggttatatctta
ccagcaattgtgcacattaacaaccaaaaaccattggagcgtggtgatggaccaattgca
ttagtattggcacctacacgcgaattggctcaacagattcaacaagttgcgacagaattc
gggtcatcttcttatgttcgaaatacttgtgtattcggtggtgctccaaaaggaggccaa
atgcgcgacttgcagcgtggatgcgagatcgtcattgccacacccggtcgtctaattgat
tttctctcaatgaatgctacaaacttgaagcgttgtacatatctagtattagatgaagct
gaccgtatgttagacatgggtttcgagccacagatccgcaaaatattgtcacagattcgc
cctgatcgccaaactctcatgtggtccgccacttggccgaaagaggttaagcaattggca
gaagatttcctcggcaactacatacaaatcaatattggctctttggagttgtcggcgaac
cataacatccgtcaagtgatcgatgtttgcgaagaacatgacaaggaagacaagctgaaa
tcattgctttccgaaatttacgataccagcgaaaaccccggcaagatcatcatatttgtg
gagactaaacgccgtgttgacaatctggtgcgtttcattcgcagttttggtgtacgttgt
ggcgccattcacggtgacaagtcacagtcagaacgtgactacgttttgcgcgaattccgt
tcgggcaagtcaaacattttggtagcaaccgacgtggctgcacgcggtttggacgttgat
ggcatcaaatatgtgattaatttcgattacccacaatcgtcggaggactacattcacaga
ataggacgcactggacgttccaatacaaagggcacttcatatgcattctttaccaaaaac
aatgccaaacagtcgagagcgctggttgatgttttacgagaggctaatcaggaaatcaat
cctgcactagagggtatggcgcgcagtaaccgaggtttcgatggtggccgttcccgctac
ggtggtggcggcggcaactctcgcttcaatggcaccttcagaaagggtgcgataggcggc
ggtggcaatggtggacgtggttacggtggtggttatggcggtaacagcggcggcggttat
ggcggtggtcgcagtaacggctacagcaataccaacagcggcgaaaatggttatggcaat
cgtaatgctgccaacagtagtagtggaggaggcagacagcatacgcgttttgattaa
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