Anastrepha obliqua (West Indian fruit fly): 129250838
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Entry
129250838 CDS
T09777
Name
(RefSeq) UV excision repair protein RAD23 homolog A isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03420
Nucleotide excision repair
aoq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129250838
09124 Replication and repair
03420 Nucleotide excision repair
129250838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aoq03051
]
129250838
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129250838
Proteasome [BR:
aoq03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
129250838
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
129250838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Rad60-SLD_2
Crinkler
UBA_9
PI3K_rbd
Motif
Other DBs
NCBI-GeneID:
129250838
NCBI-ProteinID:
XP_054746408
LinkDB
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Position
6
Genome browser
AA seq
578 aa
AA seq
DB search
MIVTVKNLQQQTFTIEFDPERTVFQLKEKICDERGSDYVVGKQKLIYAGVILDDKRTIAS
YNIDEKKFVVVMIKRDIGNYVQKPDEGGASTSTPISLITDNETIKENPKERNISVKDESK
HKSVGNRSSDQDKKSVENEGRNINKKVAVLGSTGNNASILAKGSGAFLSGTTVGSGGSET
SHSSFSSGDLAGFLSNTSLQSRAESNLLMGEEYNRTVASMIEMGYSRTMVLSAMAASYNN
PERAVEYLISGLPEVPDGFNATTAAVGEDKPDNSAAGDGETPRTSSDGGEDVEPANHIYS
IDDNLSSRDGVYGQHSSESHNASLGNVLRPAHEDPFRFLRNQPQFLLMRSLVYENPDSLH
SLLQQIGRTNPPLLQLISENQEAFLSMLNRSRERQTGTNRQYPPPDMTERRAQLAAGGDG
WHIRPLDTTQGAGGDAPAPQQRPGESGDARSHTLSNHIRPPRSETAAEHRAAIAEAFMRE
RAAAAAAVAELLATASAAVGRDPNEDCGSATNTAATNNVSDSGISENGSVRLTQHDKEAI
ERLTALGFPEGLVLQAYFACDKDEQLAANFLISSTFDD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcaccgtcaaaaacttgcagcaacagacgttcacaattgagttcgatcctgaa
aggacggtattccaattgaaggagaaaatctgtgacgagcgcggatccgattatgttgta
ggaaaacaaaagctcatatatgctggtgtaatacttgatgacaaacgcaccatagcatca
tacaacatagatgaaaagaaatttgttgtggtaatgattaaacgcgatattggaaattat
gtacaaaaaccagacgagggcggtgcatccacatctactccaatatcattaatcactgat
aatgaaactataaaagaaaacccgaaggaacgtaatatctctgtgaaagatgaatccaag
cataaatccgtaggtaatagaagctcagaccaggataaaaaatctgtggagaatgaaggt
aggaacattaacaagaaggttgctgttttaggctctactggaaacaatgcaagcatttta
gcgaagggatctggtgcatttctttctggaaccactgttggctctggtggttccgaaact
agtcatagctctttctcgagcggtgatcttgctggttttctctcaaatacatccctgcaa
tcacgagctgaatcaaatttactcatgggggaagaatataatcgcacagttgcatcaatg
attgaaatgggctattctcgtacaatggtcttaagcgctatggcagctagttacaataat
ccagagagggcagtagaatacttaattagtggattaccagaggttccagacggattcaat
gcaaccacagcagctgttggggaagataagccagacaatagtgctgcgggtgatggggaa
acacctcgcacgagtagtgatggcggtgaggatgtcgaaccggcaaaccatatttacagc
attgatgacaacttgagttcccgtgacggggtatacggtcaacactcttcggaaagccat
aatgcatcattaggtaatgtgttgcgtcctgcccatgaagatccatttcggtttttacgc
aatcaacctcagttcttactgatgcgctcgttagtgtatgagaaccccgattcattacat
tcactgcttcagcaaattgggcggactaatcctcctctgcttcaactgatatcggaaaac
caagaagcttttttaagcatgcttaaccgatcaagggaacggcaaactggtactaaccgc
caatatcctcctcctgacatgacagaaaggcgtgcacagctggcagctggtggtgatggt
tggcatatacgacctcttgatacaactcaaggagcaggtggtgatgcccctgctccacaa
caacgccctggagaaagtggcgatgcacggtcgcataccttatcaaatcacattcgacca
cctcggtcagaaacagcagcagaacaccgtgctgctattgctgaagccttcatgcgcgaa
agagctgctgctgcagctgcagtagcggaattacttgctactgcttcggccgcggtcgga
cgtgatccgaatgaagactgtggcagtgctacaaatacagcagctactaataatgtgtct
gactcaggcatttcggagaatggttctgttcgtctaacacagcatgacaaagaagcgatt
gagcgtcttacagctcttggtttccctgaaggtctggtattgcaagcgtattttgcgtgc
gataaagatgagcagttggccgctaattttttgatatcttcaacatttgatgattaa
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