Anastrepha obliqua (West Indian fruit fly): 129253252
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Entry
129253252 CDS
T09777
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03082
ATP-dependent chromatin remodeling
aoq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129253252
03083 Polycomb repressive complex
129253252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoq03036
]
129253252
Chromosome and associated proteins [BR:
aoq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
129253252
Histone modification proteins
HAT complexes
HATB complex
129253252
HDAC complexes
Sin3A-HDAC complex
129253252
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
129253252
PRC2.2
129253252
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
129253252
Heterochromatin formation proteins
Other heterochromatin formation proteins
129253252
Chromatin remodeling factors
NuRD complex
129253252
NuRF complex
129253252
NuRF complex (fruit fly)
129253252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
129253252
NCBI-ProteinID:
XP_054747526
LinkDB
All DBs
Position
1:36793764..36795643
Genome browser
AA seq
429 aa
AA seq
DB search
MVDRSDNAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQE
GKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEI
EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQ
KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHL
LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIP
ASELETPTA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcgtagtgataatgctgagtctttcgatgatgccgtcgaggaacgtgtcatt
aacgaggagtataaaatctggaagaaaaatactccatttctgtacgatttggtaatgacc
cacgccttggaatggccatcgctaaccgcacagtggcttccagacgtgactaagcaggaa
ggtaaagattattcggtgcatcgtttaatcctgggaactcatacatcggatgaacaaaac
cacttgctcattgcaagcgttcagttgcccagcgaagacgcacagttcgatggttctcac
tacgacaatgagaaaggggagtttggagggtttggatcggtttgtgggaagattgaaatc
gaaattaaaatcaaccatgagggtgaagtaaatcgagcacgttatatgccccaaaatgcg
tgtgtaattgctacaaaaacgccatcaagtgatgtgcttgtgtttgattacacgaaacat
cctagtaagccagaaccatcaggagaatgtcatccggacttgcgcttacgaggacatcag
aaagaggggtacggtctgtcatggaatccaaatttaaatggttatctgttatctgcgtct
gatgatcatacaatttgcctttgggatattaacgcgactcctaaggaacacagggtaatt
gatgcaaagaatattttcaccggtcacactgcagtagtggaagatgttgcctggcatttg
ctgcatgaatcactttttggctctgtggctgatgatcagaaactaatgatttgggatact
cgtaataataatacatcgaaaccatctcacactgtagatgcacacacagccgaagtaaat
tgcttaagttttaacccctattcggaattcattttggctaccggttctgctgataaaaca
gtagctttatgggatttgcgtaatcttaaattaaaattgcattccttcgagtcacataag
gacgagatcttccaagtgcaatggtcgccccataatgaaacaatcttggcatcgtctggt
acggatcgccgtctacacgtatgggatttgtcaaaaataggcgaagaacagagcgcagaa
gatgccgaagacggacctcctgagctattgtttattcacgggggacatacggcgaagatt
tcagacttctcgtggaatcccaacgaaccttggataatttgttctgtttcagaggacaac
atcatgcaagtttggcaaatggccgaaaatgtttataatgatgaagaacccgaaatacca
gcatctgaattagaaacacccaccgcctaa
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