KEGG   Anastrepha obliqua (West Indian fruit fly): 129253348
Entry
129253348         CDS       T09777                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
aoq  Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03013  Nucleocytoplasmic transport
aoq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aoq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129253348
  09122 Translation
   03013 Nucleocytoplasmic transport
    129253348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoq03019]
    129253348
   03041 Spliceosome [BR:aoq03041]
    129253348
Messenger RNA biogenesis [BR:aoq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     129253348
Spliceosome [BR:aoq03041]
 Complex C
  Other components
   EJC/TREX
    129253348
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129253348
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_Vps41 eIF2A Beta-prop_HPS5 Beta-prop_EML RMC1_N WD40_MABP1-WDR62_1st PD40 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_ELP1_1st Beta-prop_DCAF12 Peptidase_S9_N DPPIV_N Beta-prop_Nup120_160 baeRF_family5
Other DBs
NCBI-GeneID: 129253348
NCBI-ProteinID: XP_054747664
LinkDB
Position
1:complement(159818565..159820277)
AA seq 321 aa
MSKTHSNLEDLRTYFKTHGKIREQKAHTSKVHSVGWSCDGRRLASGSFDKTVAVYTLERD
RVSKENTYRGHTGSVDQLCWHATNSDLLSTASGDKTVRIWDIRAGKCSTVTNTKGENINI
TWSPDGKTIAVGNKEDLVTFIDTRTNKIRAEEQFNFEVNEIAWNNSSDLFFLTNGMGCVH
ILSYPSLELQHVLKAHPATCICIEFDPTGKYFATGSADALVSLWDANELACLRVLSRLDW
PVRTISFSHDGKLLASASEDLLIDIAHTATGEKVADVTVDAATFTVAWHPKQYLLAYACD
DKDGNDRRREAGNLKVFGFSE
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtcaaaaacacattcgaatttagaagatttgcgaacatatttcaaaacacacggcaaa
atccgagagcaaaaggcgcacacatcgaaggtgcactctgttggctggagctgtgatggc
agacgtttggcctctggctcttttgacaaaacggtggctgtatacacactggaacgcgat
cgtgtgagcaaagaaaatacatatcgcggtcacaccggctcagtggatcagctttgttgg
catgctacaaattcagatctgctcagtacggctagtggtgataagactgtccgcatatgg
gacatacgcgccggcaaatgttcgactgttacaaatacaaaaggtgaaaatataaatata
acatggtcgcctgatggcaaaaccatagctgtgggcaataaagaggacttggtgacattt
atagatacgcgcacaaataaaatacgtgccgaggagcagttcaattttgaggtaaacgaa
attgcgtggaataattcgagtgatttgtttttcttgaccaacggcatgggctgcgtacac
attttaagttatcccagtctggaattgcaacacgtattgaaggctcatcctgccacctgt
atttgcattgaattcgatcccaccggtaaatattttgccacaggctcagcagacgcactt
gtctcgctgtgggatgccaatgagttagcctgtctgcgcgtgctctctcgactggattgg
ccagtacgtacgatttctttcagtcacgacggaaaactgttggcgtcggctagcgaagat
ttgctcatcgatatagctcatacggcaacaggcgaaaaagttgcagacgttactgtagac
gcggcaacttttacagtggcctggcacccgaaacaatatttacttgcctatgcttgtgac
gataaagatggtaacgatcgaaggcgtgaagcgggtaatctaaaagtttttggtttttcg
gagtaa

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