Amycolatopsis orientalis: SD37_06335
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Entry
SD37_06335 CDS
T06703
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aori
Amycolatopsis orientalis
Brite
KEGG Orthology (KO) [BR:
aori00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aori03400
]
SD37_06335
DNA repair and recombination proteins [BR:
aori03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SD37_06335
Archaeal homologous recombinant proteins
SD37_06335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
ABC_tran
TsaE
SlyX
NACHT
AAA_22
nSTAND3
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ANN15312
UniProt:
A0A193BSX7
LinkDB
All DBs
Position
1300235..1303186
Genome browser
AA seq
983 aa
AA seq
DB search
MRLHRLEVAAFGPYAGREVVDFDALGADGLFLLHGDTGAGKTTLLDAIAFALFGTVPGAR
GEVKRLRCDLAEPDQVTEVVLELTVQGQRMRIARNPEYQRPKRRGEGMTVQQAKAVLNWV
GTVPAGHVAEGITRIDDVARTVERLIGMTHEQFFQVVLLPQGEFARFLRASTAEREELLE
RLFGTERFACVEDWFANLRAERGRELQARQQSLREWVARFAQVAQQEAPEEGQAEWVEEV
LAESAERVAVARERESKARTAAKTAEAIWQENRTTAERIRRVRTAYTRLSAIAEQAEQRA
EWAEEVEAAHRAAGVVAEADLLERRLAQLAEAEATEALRAREVPDAADGSAAELRARAGG
VREEAGALAGLVAESEQQQRDLVRREQLNAAVEKAKKQAEEFAAELDSAPEKVAALRAEV
TAAAEAEAKLDGARVRVDELTTLLRDADELPKARQVVERARATVSEAVDLHQQARQHRLD
LRERRLDGMAAELAAGLHAGEDCPVCGATEHPAPAKHTGGLVDPEDERRAELVEQQADGR
REKAKATLLEAENRLTALVERLGEHTAETLRTGLGEARELVASLSEKAGRKPALETRLVT
LERNIEQLTERRRTAERSAVEVETEVRGLTERLAERERRLDSARGEFSDVAARRRHLLGF
AARLDALAEARLAVAGARERRDEQAKLVEEALRAKGFADLDQMRAAARPDEQITKLENSL
ADAKVMEETERRALAEPELFGISPEDEIDVAASEEAARETRGEAEQALVALRTATTRHTD
LTGLAARMTSMMADLAPVEERYLELKALAEVVNGRGQNARKMSLRSYVLAARLEEVAVAA
TARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDYSGTVRPAKTLSGGESFLASLSLA
LGLADVVAAETGGALLDTLFIDEGFGTLDAETLDIVMSILDELRAGGRVVGLVSHVEELR
QRIPTRLRVRKARTGSTVEIHAA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccggctggaggtcgccgctttcggcccgtacgcgggccgcgaggtggtg
gacttcgacgcgctcggcgccgacgggctgttcctgctgcacggcgacaccggcgcgggg
aagacgacgctgctcgacgccatcgcgttcgcgttgttcggcacggtccccggcgctcgc
ggtgaggtcaagcggctgcgctgcgatctcgccgagcccgaccaggtcaccgaggtcgtc
ctcgaactgaccgtgcagggccagcggatgcggatcgcgcgcaaccccgaataccagcgg
cccaagcgccgcggcgagggaatgaccgttcagcaggcgaaggcggtgctgaactgggtc
gggacggtgcccgccgggcatgtcgccgagggcatcacccggatcgacgacgtcgcgcgc
acggtcgagcggctcatcgggatgacgcacgagcagttcttccaggtggtgctgctcccg
cagggcgaattcgcgcggttcctgcgtgcgagcacggccgagcgggaggaactgctggag
cggctgttcggcaccgagcgcttcgcgtgcgtcgaagactggttcgcgaacctgcgcgcc
gaacgcggccgtgagctgcaggcgcggcagcagtcgttgcgggagtgggtcgcgcggttc
gcgcaggtcgcccagcaggaagcgcccgaagaggggcaggccgagtgggtcgaagaggtc
ctcgccgaatcggctgagcgcgtcgccgtggcgcgggaacgggagagcaaggcgaggacg
gcggcgaagaccgccgaggcgatctggcaggagaaccggaccaccgccgagcgcatccgc
cgggtgcggaccgcgtacacccgtctttcggccatcgccgagcaggccgagcagcgcgcg
gagtgggcagaggaggtcgaggcggcccaccgtgcggcgggcgtggtcgcggaggccgat
ctcctcgaacgcaggctggctcagctcgcggaggccgaagccaccgaagccctccgggcc
cgtgaggtgcccgacgccgcggacggttccgccgccgagctccgcgctcgcgccggcggg
gtgcgggaggaggccggggcactcgccggactcgtggcggaaagtgagcagcagcaacgg
gatctggttcgccgagagcagctgaacgcggccgtggagaaggcgaagaagcaggcggag
gagttcgccgccgaactcgattccgccccggaaaaggtcgcggccttgcgcgccgaggtg
accgccgccgccgaagccgaagcgaaactcgacggtgcccgcgtccgcgtcgacgagctg
accaccctgctccgcgacgccgacgagctgcccaaggcccggcaggtcgtcgagcgggcg
cgtgcgacggtcagcgaggccgtggacctccaccagcaggcccgtcagcaccgcctggac
ctgcgcgagcgccgcctcgacgggatggccgccgaactcgccgccgggctgcacgcgggc
gaggactgcccggtctgcggcgcgaccgagcatccggcgcccgcgaagcacaccggcggg
ctggtcgatcctgaagacgaacgtcgcgccgaactcgtggaacaacaggccgacgggcgg
cgcgagaaggcgaaagccacgttgctggaagccgaaaaccggctgacggccctggtcgaa
cggctcggtgagcacactgcggaaacactgcggaccggtctcggcgaggcgcgcgagctg
gtcgcgtcgctgtccgagaaggccggtcgcaagcccgcgctcgaaacccggctcgtcacg
ctggaacggaacatcgagcagctgaccgaacgccgccgcaccgccgagcggagcgcggtc
gaggtcgagaccgaggtcaggggcctcacggaacggctggccgaacgggaacgacggctg
gacagcgcccgcggcgagttctccgacgtcgccgctcgtcgtcggcacctgctgggcttc
gcggcccgcctcgacgcgctcgccgaagcacggctcgccgtcgcaggtgccagggagcgc
cgcgacgagcaggcgaaactggtcgaggaagcattgcgggccaagggtttcgcggatctc
gaccagatgcgtgccgcggctcggccggacgagcagatcacgaaactggaaaacagcctc
gccgacgcgaaggtgatggaggagaccgagcggcgcgcgctggccgaaccggaactcttc
ggcatctcgccggaggacgagatcgacgtcgccgcctccgaagaagccgcgcgggaaacc
cggggcgaggccgagcaggccctcgtggcgctgaggacggccacgacccggcacacggac
ttgaccgggctggcggcgcggatgacgtcgatgatggctgacctggcgccggtcgaggag
cggtacctcgaactgaaggcgctggctgaagtcgtcaacggacgcgggcagaacgcgcga
aagatgtctctgcgctcgtacgtcctggcggcccggctggaggaggtcgcggtcgcggcg
accgcccgcctgcggacgatgagccagggccgctactccttcgtgcactcggacgcggcc
ggtgcccgcggtactcgcggcgggctcggactcgacgtgctcgacgattactcaggcacc
gtccggcccgcgaagaccctgtccggcggcgagtccttcctcgcgtcgctctcgctggcg
ctgggcctcgccgacgtcgtcgccgccgaaaccggcggagcgctactggacaccctgttc
atcgacgagggcttcggcaccctggacgccgaaacgctcgacatcgtcatgagcatcctc
gacgagcttcgcgccggtgggcgcgtggtcgggctggtctcgcatgtcgaggagttgcgg
cagcggatcccgacccgcctgcgggtccggaaggcgcgcaccgggtcgaccgtggagatc
cacgccgcctga
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