Amycolatopsis orientalis: SD37_19710
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Entry
SD37_19710 CDS
T06703
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
aori
Amycolatopsis orientalis
Brite
KEGG Orthology (KO) [BR:
aori00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aori03019
]
SD37_19710
Enzymes [BR:
aori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SD37_19710
Messenger RNA biogenesis [BR:
aori03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SD37_19710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ANN17654
UniProt:
A0A193BZR1
LinkDB
All DBs
Position
4513887..4516664
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AA seq
925 aa
AA seq
DB search
MVNSPSQTPAEAYAASQRRARYPQLTRFAAESAFEFDDFQIRGCEALEAGHGVLVCAPTG
AGKTVVGEFAVHLALAEGRKCFYTTPIKALSNQKYADLVGRYGADAVGLLTGDTSINGNA
QVVVMTTEVLRNMLYAGSSTIGELAYVVMDEVHYLADRFRGAVWEEVILHLPEHVRVVGL
SATVSNAEEFGEWLVEVRGDTTVVVDEHRPVPLWQHMLVGNRLMDLFAGQEEHAPGAELR
INPSLLRRTEEIGGRFAPAGLRGPRGRRGAPSRMPRYRPPSRTETVERLDNAGLLPAIVF
IFSRAGCDAAVGQCVRSGLRLNGPDEVEKVRRIVAERTKDLPEGDLGVLGFWEWREALER
GIAGHHAGLLPAFKETVEELFVQGLVKVVFATETLALGINMPARTVVLERLVKYNGEAHV
DLTPGEYTQLTGRAGRRGIDVEGHAVVAWQPGIDPKQVGGLASTRTYPLRSSFRPGYNMA
VNLVAQVGAEAARDLLEQSFAQFQADRSVVGTARRIERNKEALRGYTAAITGDFDEMLEY
VELRAKISAREKALSRQNTSARRAGTAESLEKLRKGDVIAVPAGRRAGLAVVVDPGLDPI
REPRPVVVTEDRWSGPLSVSDFPSPVEALGNIKLPKHIELRSPKTRRDIASSLRNAGISL
PGRQKRRAGANEDGELAALRRALRSHPCHGLAEREANLRWVERYQRLTAETEQLERKVAA
TTHSLARAFDRILRLLGERGYLGPESKGDGEDRVTEHGKRLTRLYSESDLLAAECIRHDV
WKGLAPAELAAVVSTLVFEARRDIAGEPRLPAGKVLDAWQATTRLWMELTDDERRHKLDR
TREPDAGFAWPIYRWARGESLEKVLTAAEANGQELSAGDFVRWSRQVIDLLDQIRDVLGR
ADPVGAAASDAVKALRRGVVAAGGA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaacagcccttctcagaccccggccgaggcgtacgcagcctcccagcgccgcgct
cggtatccccagctgacccggttcgccgcggaatcggcgttcgagttcgacgacttccag
atccgcgggtgcgaggcgctcgaagcaggccacggcgtgctcgtctgcgcgcccaccggg
gccgggaagacggtggtcggcgagttcgcggtgcacctcgccctcgccgaagggcgcaaa
tgcttctacacgacgccgatcaaggcgctgtcgaaccagaagtacgccgacctggtcggc
cgctacggcgccgacgccgtcggcctgctcaccggtgacacctcgatcaacggcaacgcc
caggtcgtggtcatgaccaccgaggtcctgcgcaacatgctctacgccgggtcgtcgacc
atcggcgaactcgcctacgtggtgatggacgaggtgcactacctcgccgaccggttccgc
ggcgcggtctgggaggaggtcatcctccatctgcccgagcacgtccgggtcgtcggcctg
tcggccacggtgagcaacgccgaggagttcggcgaatggctggtcgaggtccgcggcgac
accaccgtcgtggtcgacgagcaccgtcctgtgccgctgtggcagcacatgctggtcggc
aaccggctgatggacctgttcgccggccaggaggaacacgcgccgggcgccgagctgcgg
atcaaccccagcctgctgcgccgcaccgaggagatcggcggacggttcgcaccggccggg
ttgcgcgggccgaggggacggcgaggggcgccgtcgcgaatgccgcggtaccggccgcca
tcccgcaccgagacggtcgagcgcctggacaacgccgggctgctgcccgccatcgtcttc
atcttctcccgcgcgggctgcgacgccgccgtcggccagtgcgtccggtccggcctgcgg
ctgaacggccccgatgaggtcgagaaggtccgccgtatcgtcgccgagcgcaccaaggac
ctgcccgaaggcgacctcggcgtcctcggcttctgggaatggcgggaggcgcttgagcgc
ggtatcgccggtcaccacgccgggctgctcccggcgttcaaggagaccgtcgaggaactg
ttcgtccaggggctggtgaaggtcgtcttcgccaccgagacgctcgcgctcggcatcaac
atgcccgcgcgcaccgtcgtcctcgaacggctggtgaagtacaacggcgaggcgcacgtg
gacctcacgccgggggagtacacgcaactcaccgggcgggccgggcggcgcgggatcgac
gtcgaaggccatgccgtcgtcgcctggcagccggggatcgacccgaagcaggtcggcggc
ctcgcctcgacccggacgtacccgctgcggtcgtcgttccggcccggctacaacatggcg
gtgaacctggtcgcgcaggtcggcgccgaagcggcccgtgacctgctggaacagtcgttc
gcgcagttccaggccgaccggtcggtggtcggcaccgcgcggcggatcgagcggaacaag
gaggccctgcggggctacaccgccgccatcaccggcgacttcgacgagatgctcgagtac
gtcgagctgcgcgcgaagatctcggcgagggaaaaggcgctttcgcggcagaacacctcc
gcgcgccgggcgggtacggccgaatcgctggagaaactccgcaagggagacgtcatcgcc
gtgcccgcgggcaggcgcgcggggctcgcggtggtcgtcgacccggggctcgacccgatc
cgggaaccgcgtccggtcgtggtcaccgaggaccgctggtccggtccgctctcggtgtcg
gacttcccgtcgccggtggaggcgctggggaacatcaagctgccgaagcatatcgagctg
cgttcgcccaagacccgccgtgacatcgcgtcgagtctgcgcaacgccggaatctccttg
cccggcaggcaaaagcgccgggccggggccaatgaggacggtgagctggccgccctgcgg
cgcgcgctgcggtcgcatccgtgccacggtctggccgagcgtgaggcgaacctgcgctgg
gtcgagcggtaccagcggctcacggcggagaccgagcagctggaacgcaaggtcgccgcg
accacgcactcgctcgcccgcgccttcgaccgcatcctgcggctgctgggcgagcgcggc
tacctcggccccgaatccaagggcgacggcgaggaccgcgtcaccgaacacggcaagcgg
ctcacccggctctacagcgagtccgacctgctcgccgccgagtgcatccggcacgacgtc
tggaagggcctggcgcccgccgaactcgcggccgtcgtctcgacgctggtcttcgaggcg
cgccgcgacatcgcgggggagccgcggctgcccgcgggcaaggtgctcgacgcctggcag
gcgaccacgcggctgtggatggaactcaccgacgacgagcgacggcacaagctggaccgc
acccgcgagccggacgcgggtttcgcctggcccatctaccgctgggcgcgcggcgaatca
ctggagaaggtcctcaccgccgccgaggcgaacggtcaggagctgtccgccggcgacttc
gtgcgctggtcgcggcaggtcatcgacctgctggaccagatccgcgacgtcctgggcagg
gccgacccggtcggcgcggccgcctcggacgcggtgaaggccctgcggcgcggcgtggtc
gcggcgggcggcgcctga
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