Amycolatopsis orientalis: SD37_23555
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Entry
SD37_23555 CDS
T06703
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aori
Amycolatopsis orientalis
Pathway
aori00040
Pentose and glucuronate interconversions
aori01100
Metabolic pathways
aori02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aori00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SD37_23555
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD37_23555
Enzymes [BR:
aori01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SD37_23555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
ANN18318
UniProt:
A0A193C1P0
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All DBs
Position
5383587..5384525
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AA seq
312 aa
AA seq
DB search
MTKKTLRTAIAVTVLAAGTILGSAPATAASFDLAGWATQGGGTTGGGSAAPVTVSTSSAL
ISAMQSSSPAVIRVSGSIALSGMQKVAANKTILGVGSGAEITGGGLNITKVSNVIVRNLN
FRNWSDDAINVQYSTRVWIDHNSFSNGYDGAVDVKRASDYVTVSWNKFSSHDKTMLLGHS
DDNGGEDRGKLRVTYHHNWFAGTNQRHPRVRFGNPVHVYNNYYASVGSYGVASTMEAGVL
VEGNYFENTKDPFHRGEGSSPAGSLVARNNHFVNSGAGDAGGSVKSLPYSYSLDAAANVA
SVVRSGAGTGKL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaaaccttgcgtacggccatcgccgtgaccgtgttggcggcggggaccatc
ctcggttccgcaccggcgaccgcggcgtcgttcgatctcgccggctgggcgacccaaggc
ggcggtacgaccggcggcggcagcgcggcgccggtgaccgtgtcgacgtcgtcggcgttg
atctcggccatgcagtcctcgagtccggcggtgatccgggtctccgggtccatcgccctc
tcgggaatgcagaaggtcgccgccaacaagacgatcctcggcgtcggctccggcgccgag
atcaccggcggcgggctcaacatcaccaaggtctccaacgtgatcgtccgcaacctgaac
ttccggaactggtcggacgacgcgatcaacgtccagtattcgaccagggtgtggatcgat
cacaacagcttctcgaacggctacgacggcgccgtcgacgtcaaacgcgcgtcggactac
gtcaccgtgtcctggaacaagttcagctcgcacgacaagacgatgttgctggggcacagt
gacgacaacggcggtgaggaccgcggcaagctccgggtgacctaccaccacaactggttc
gcgggcacgaaccagcgccatccgcgggtgcgtttcgggaaccccgtccacgtgtacaac
aactactacgccagcgtcggttcctacggcgtcgcgtccacaatggaggcgggtgtcctg
gtcgaaggaaactacttcgagaacacgaaggacccgttccaccgcggcgaaggcagctcg
cccgcgggcagcctggtcgctcgcaacaaccatttcgtcaactccggcgccggtgacgcc
gggggcagcgtgaagagtctcccctactcgtattccctcgacgcggcggcgaacgtcgct
tcggtggtccggagcggggcaggcaccggcaagctctga
DBGET
integrated database retrieval system
