KEGG   Amycolatopsis orientalis: SD37_30125
Entry
SD37_30125        CDS       T06703                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
aori  Amycolatopsis orientalis
Brite
KEGG Orthology (KO) [BR:aori00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aori03032]
    SD37_30125
   03036 Chromosome and associated proteins [BR:aori03036]
    SD37_30125
   03400 DNA repair and recombination proteins [BR:aori03400]
    SD37_30125
DNA replication proteins [BR:aori03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SD37_30125
Chromosome and associated proteins [BR:aori03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SD37_30125
DNA repair and recombination proteins [BR:aori03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SD37_30125
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: ANN19458
UniProt: A0A193C506
LinkDB
Position
complement(6950120..6950788)
AA seq 222 aa
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGSKKLPKATAVKRATTGTTTRTAATRATTT
RTAASRPAATRSTTTRTRAAAATTRTAAKPAAKATATKAAAKTTATKAAPKTAAKATTTR
ATTAKKATATKAAAKPAAKATAAKAPAKKAPAKRTSAAAKKK
NT seq 669 nt   +upstreamnt  +downstreamnt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgcctgggcgacaagaaggtc
gcgtcggaggccgtcgatggccttgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgcgcccgcgccgcccgcaccgcg
cggaacccgcgtaccggtgagaccgttcgcgtcaagaagaccaacgtgcccgccttccgc
gccggcacgaccttcaaggacgtcatcagcggttcgaagaagctgccgaaggccaccgct
gtgaagcgcgcgaccaccggcaccaccacccggaccgccgccacccgcgcgacgacgacc
cggacggccgccagccgcccggccgcgacgcgttccaccaccacgcggacccgtgccgcc
gccgccacgacgcgcaccgccgcgaagccggccgccaaggcgaccgcgaccaaggcagcg
gccaagacgaccgccaccaaggcggcgccgaagaccgcggccaaggccacgacgactcgc
gccaccacggccaagaaggcgaccgccaccaaggccgccgcgaagccggccgccaaggcc
accgccgccaaggctccggccaagaaggccccggccaagcggacttcggcggccgcgaag
aagaagtaa

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