Amycolatopsis orientalis: SD37_30475
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Entry
SD37_30475 CDS
T06703
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aori
Amycolatopsis orientalis
Pathway
aori03420
Nucleotide excision repair
aori03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aori00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SD37_30475
03430 Mismatch repair
SD37_30475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aori03400
]
SD37_30475
Enzymes [BR:
aori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD37_30475
DNA repair and recombination proteins [BR:
aori03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SD37_30475
MMR (mismatch excision repair)
Other MMR factors
SD37_30475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ANN19519
UniProt:
A0A193C4Z3
LinkDB
All DBs
Position
complement(7021984..7023864)
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AA seq
626 aa
AA seq
DB search
MSRALATELASLNDAQRKVVAHSGSLVVRAGPGSGKTRTLVAKVGDLLGARISPRQGLAA
ITYTRQAAREIRVRLDRLGIRPGRRLACGTVHGWCLAAVLRPYGPLVGISAPTQGAVIDD
GDDKWLALLQRSFTEVGLRNQVEYEKAKITKLRREIAAGYVEVGEANPMVEAAVRFDEHL
LAEGLWDFDAMVARTLAIVRDEPTVARLVADRYPWLVVDEYQDLGPVLHELVLTLHDEAG
AGVAAFGDPDQSLMGFTGADPLYLNELTELPGFRDLPLTVNYRCGRAIVAASEAALRDER
GYEADPRRDDTGTIEPIAVTGGLESHAAAVIRKLEELVAAGVPEHHIVVLYPRKGPLLDD
LTAALAQSRFEYVHERDERLPQGPLADFLRACAARAVAGYQPLGVEDTTAVSPLGELCEE
YKRLRESSGLEPLRGRSVERLLATSLNDTDSADRPLGEWLVGLSSAINLPAVAAGSPAAK
DRYVLKAFYEVAERHSLTVRDIATGTLRAGKITLTTYHSAKGREWPVVIMPGLVDGIMPR
RPWDKWSRTFAEPSPPDLAQDRRSFYVGLTRAKDAVVMITGTYWVSRRDRPPNFYGVSRF
AEDVLTHIDRVEKQEDGDRGGYRSLE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggcacttgccaccgagctggcgtcgctcaacgacgctcagcgcaaggtggtc
gcacattccgggagccttgtcgtccgggcaggcccgggttcgggcaagacacgcaccctg
gtcgccaaggtgggtgatctcctgggggcccggatctcgccgcggcaggggctcgcggcc
atcacctatacgcggcaggcggcacgggagatccgcgtccggctcgaccggctcggtatc
cggccgggacgacggctcgcctgcggcacggtccacggctggtgcctggccgccgtgctt
cgtccttacgggccgctggtgggaatatccgctcccacgcagggggccgtcattgacgac
ggcgacgacaagtggctcgccttgctgcagcgttccttcactgaagtcggcctgcggaac
caggtcgagtacgagaaggcaaagatcacgaagcttcggcgggagatcgcagccggatac
gtcgaagtcggcgaggccaaccccatggtcgaggcggctgtgcgcttcgatgaacatctg
ctggccgagggcctgtgggacttcgacgccatggtcgcccgcacgctggccatcgtcagg
gatgagcccactgttgcccggctcgtggccgatcggtacccgtggctggtcgtggacgag
taccaggacctcggccccgttctgcacgagctcgtcctgaccctgcacgacgaggccggt
gccggtgtggcggccttcggcgatcccgaccagtccctgatgggattcaccggagcggat
ccgctgtatctgaacgaactgaccgagctgcccggcttccgcgatctgcctctcacagtg
aactaccggtgtgggcgggcgatcgtcgccgccagcgaggcagccctcagagacgagcgc
ggctatgaagccgacccccggcgagacgataccgggacgatcgagccgatcgccgtgaca
ggtgggctcgaatcgcacgcggcggcggtgatccggaagctggaggagctggtcgccgca
ggtgttcccgaacaccacatcgtggtcctgtacccgcgcaaaggcccgcttctcgacgac
ctcacggcagccctcgcacagagccgcttcgagtatgtccatgagcgcgacgagcggcta
ccccaaggcccgcttgccgacttcctccgcgcatgcgcggcgcgagcagtcgccgggtac
cagccgctcggggtagaggacactactgcggtgtcgccgctgggcgaactctgcgaggag
tataaacggctacgggagagcagtggtctcgagccgcttcgcgggcggtcggtcgaacga
ctgctcgctacctcgctcaacgacacggactcggccgatcgcccgctcggtgagtggctc
gtcgggctgtcgtcggcaatcaaccttcctgccgtcgctgcaggcagccctgctgcgaag
gaccggtatgtgctcaaagcgttctacgaagtcgcagaacggcacagtcttaccgtgcgg
gacattgcgaccggcacgctccgggctggcaagatcaccttgaccacttaccattctgcg
aagggacgcgagtggccggtggtgatcatgccgggactcgtggacggcatcatgccgcgg
cgtccttgggacaagtggtcgcggaccttcgccgagccttcaccaccggatctcgcgcag
gaccgccgctccttctatgtcgggctgacccgcgcgaaggatgcggtcgtcatgatcacc
ggcacgtactgggtttcgcgacgtgacaggccgccgaacttctacggcgtctcgaggttc
gcggaggacgtcctgacccacatcgaccgcgtggagaaacaggaagacggtgaccggggt
ggttaccggagcctggagtga
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