KEGG   Amycolatopsis orientalis: SD37_40235
Entry
SD37_40235        CDS       T06703                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
aori  Amycolatopsis orientalis
Brite
KEGG Orthology (KO) [BR:aori00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aori03021]
    SD37_40235
Transcription machinery [BR:aori03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SD37_40235
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 HTH_23 Sigma70_ECF HTH_3 HTH_24 HTH_31 MarR_2 LacI HTH_IclR HTH_Crp_2 HTH_AsnC-type HTH_7 HTH_38 HTH_Tnp_ISL3 HTH_28 HTH_37 DUF7343 KORA MarR HTH_26 GerE CENP-B_N
Other DBs
NCBI-ProteinID: ANN21206
UniProt: A0A193C9B9
LinkDB
Position
9152619..9153392
AA seq 257 aa
MTDPVGQDGADVPALFERMCALPQDDPRRERLRDDLVRAHLELARNLARKFRNRDESMED
LIQIATIGLIHAVDRFDPAQGSDFLAFAVPTISGELRHHFRDNSWSVRVPRRLKELNANI
SAVREELTVRLSRAPKPSEIAEHLGVPVDEVFEGLRAGQGRYGASLDNLLENSAHTRFGE
ADANLSQAELREALRPMLERLPDRERKIVALRFGSGMSQSDIARRVGVSQMQVSRLLAST
LQKLREGLTETELTDGV
NT seq 774 nt   +upstreamnt  +downstreamnt
gtgaccgatcccgtcgggcaagacggcgcggacgttccggccctgttcgagcgcatgtgc
gcgctgccccaggacgacccccggcgcgaacggctgcgggacgatctggtgcgcgcgcat
ctggaactcgcgcgcaacctggcgcgcaagttccgcaaccgggacgagtcgatggaggac
ctgatccagatcgcgacgatcgggctgatccacgccgtcgaccgtttcgaccctgcccag
ggcagcgacttcctggccttcgcggtgccgaccatctccggcgagctgcggcaccacttc
cgcgacaacagctggtcggtccgggtcccgcggcggctcaaggagctgaacgcgaacatc
tcggccgtgcgcgaggaactcacggtccggctttcgcgagcgccgaagccgagtgagatc
gcggagcatctcggtgtcccggtcgacgaggtcttcgagggtctgcgtgccggtcagggc
cggtacggggcttcgctggacaacctcctggagaactcggcgcacacccgcttcggcgag
gcggacgccaacctcagccaggcggagctgcgcgaggcgctgcggccgatgctggaacgg
ctgcccgaccgcgagcgcaagatcgtcgcgctgcggttcggctccgggatgagccagtcg
gacatcgcgcgccgtgtcggtgtctcccagatgcaggtgtcccggctgctggcctctacg
ctgcagaaactgcgtgaggggctgaccgagacggaactcaccgacggagtctga

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