Anaeromyxobacter oryzae: AMOR_07980
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Entry
AMOR_07980 CDS
T08524
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aory
Anaeromyxobacter oryzae
Pathway
aory03410
Base excision repair
aory03430
Mismatch repair
aory03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aory00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMOR_07980 (recJ)
03430 Mismatch repair
AMOR_07980 (recJ)
03440 Homologous recombination
AMOR_07980 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aory03400
]
AMOR_07980 (recJ)
DNA repair and recombination proteins [BR:
aory03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AMOR_07980 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMOR_07980 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AMOR_07980 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
BDG01802
LinkDB
All DBs
Position
complement(934305..936032)
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AA seq
575 aa
AA seq
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MTGAPAKRWVETAVDEARAAALAAALRLHPLAARVLAARGHDDAGAAERFLAARLADLPD
PFTMKGMAAAVDRIVRAVGAREKIACYGDYDVDGVTSTALLAGFLRAAGGDVVTYTPHRL
VEGYGLNRDAVAKLAGQGVRLLVTLDCGITSVEEVRAATALGVDTVVVDHHTVPVELPQA
AAILNPHQPGCDYPSKDLAAVGVTFALAMALRKRLREQGAFGERRPEPNLKDALDLVALG
TVADVVALVGANRILVRWGLEALARSRRPGIRALKAVAGIAEGTPMSAGQVGFRLGPRIN
AAGRLDDAGRGVRLLLATDEREAQALAEELDRENQARQEIERRILDEALADALERVKAGV
RGLVLARDGWHPGVVGIVASRIVEKFHRPAVLIAMEDGAGKGSGRSIEGFHLYDALSACS
GHLARFGGHKHAAGVTVARDRVDAFRSAFEAHAAERIRDEDLVPRCRIDAYVDDREITDR
AAEDLEKLGPYGAGHPEPIFALRSAAARARTVGASGAHLKLVLGGRGLDAIGFGMGDRLA
LCGEGPVDAAFTVGFDEWDGRKRLQLKLRDVRRSG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggagcgccggcgaagcggtgggtggagacggccgtggacgaggcgcgcgcggcg
gcgctcgcggcggcgctgcgcctccaccccctcgctgcccgtgtgctcgccgcgcgcggg
cacgacgacgctggcgcggcggagcggttcctcgcggcgcgcctcgcggacctgccggat
ccgttcacgatgaagggcatggcggcggcggtggaccggatcgtccgcgcggtcggggct
cgcgagaagatcgcctgctacggcgactacgacgtcgacggcgtcacctcgaccgcgctc
ctcgccggcttcctccgcgccgcgggcggcgacgtggtgacctacacgccccatcgcctc
gtcgagggctacgggctcaaccgcgacgccgtggcgaagctcgccgggcagggcgtccgg
ctcctcgtcacgctcgactgcgggatcacgagcgtcgaggaggtgcgggcggcgaccgcg
ctcggcgtcgacaccgtcgtcgtcgaccaccacaccgtcccggtggagctgccgcaggcg
gcggcgatcctgaaccctcaccagcccggctgcgactatccgtcgaaggacctcgccgcg
gtgggcgtcaccttcgcgctcgcgatggcgctccggaagcggctccgggagcagggcgcc
ttcggcgagcggcggcccgagccgaacctgaaggacgccctcgacctcgtggcgctcggc
acggtcgcggacgtcgtcgcgctcgtcggcgcgaaccgcatcctggtgcgctggggcctc
gaggcgctcgcccgctcgcgccggcccgggatccgcgcgctgaaggcggtcgccggcatc
gcggagggcacgccgatgagcgcgggccaggtcggcttccggctcgggccccggatcaac
gcggcggggcgactcgacgacgcggggcgcggcgtgcggctcctcctcgcgacggacgag
cgggaggcgcaggcgctcgcggaggagctcgatcgcgagaaccaggcgcgccaggagatc
gagcggcggatcctcgacgaggcgctcgccgacgcgctcgagcgcgtgaaggcgggcgtc
cgcgggctcgtcctcgcgcgcgacggctggcacccgggcgtggtgggcatcgtcgcctct
cgcatcgtcgagaagttccaccggccggcggtgctgatcgcgatggaggacggcgcaggg
aagggcagcggccgctccatcgagggcttccacctctacgacgcgctctcggcctgctcc
ggccacctcgcgcgcttcggtggccacaagcacgcagcgggcgtgacggtggcgcgggac
cgcgtggacgcgttccggagcgcgttcgaggcgcacgccgcggagcggatccgggacgag
gacctcgtgccgcgctgccggatcgacgcctacgtggacgaccgcgagatcaccgaccgc
gccgccgaggatctcgagaagctcggaccctacggcgccggccacccggagccgatcttc
gcgctgcgctccgccgccgcgcgcgcccgcaccgtcggcgcgtctggcgcgcacctgaag
ctcgtcctcggcggccgcggcctcgacgcgatcggcttcgggatgggcgaccgcctcgcc
ctctgcggagaggggccggtggacgccgcgttcaccgtcggcttcgacgagtgggacggg
cggaagcggctgcagctcaagcttcgcgacgtgcggcggagcgggtag
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