Anaeromyxobacter oryzae: AMOR_35180
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Entry
AMOR_35180 CDS
T08524
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aory
Anaeromyxobacter oryzae
Pathway
aory03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aory00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMOR_35180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aory03019
]
AMOR_35180
03400 DNA repair and recombination proteins [BR:
aory03400
]
AMOR_35180
Enzymes [BR:
aory01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMOR_35180
Messenger RNA biogenesis [BR:
aory03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMOR_35180
DNA repair and recombination proteins [BR:
aory03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMOR_35180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
MGS
HHH
Motif
Other DBs
NCBI-ProteinID:
BDG04522
LinkDB
All DBs
Position
4052737..4054452
Genome browser
AA seq
571 aa
AA seq
DB search
MNDLAATWRAGDPSDPGLRSACQARLEDLRARWRDGPELFGAAAIDRLRAIADALARPAP
PASGEARRLLREVFGHPAFRPGQGEIVSAVLSGRDCIGVMPTGAGKSLTYQIPARLLGGT
TLVVSPLIALMKDQVDAMARVGLRATYLNSTLSAEERRDRVRALRQGELELLYAAPEGLE
ASVGSALEGIRLSLIAVDEAHCISHWGHDFRPAYRNLAGLKARFRAPVLALTATATPEVT
GDIASQLGMGDPLVVRGSFLRRNLRIHAAKKGEGLRTRDALLGFVRARRGQAGIVYALSR
KSVEETAELLAENGVRAEAYHAGLEPDVRSRVQDAFQAGKIDVVVATVAFGMGIDKPDIR
FVLHRDLPRSVEAYYQEIGRAGRDGNPSTCLLLYSWADVMSWDRMLDDSDAELADGQRRQ
ARSMFRFADEGGCRHERLVGHFGEVADPCGDACDHCTGDDVLASAMASARGAGGGRRRRA
DRSRREAREGREGPETAEADVALFEALREWRAGEARSRGVPAFVVFSDATLAELARARPV
TEDALLEVKGVGPKKLGEYGDALLAILREAE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacctcgccgcgacctggcgggccggagatccgtccgatccgggcctccggtcc
gcgtgccaggcgcggctcgaggacctccgggcgcgctggcgcgacgggccggagctgttc
ggcgcggccgcgatcgatcggctgcgtgcgatcgccgacgcgctcgcacgccccgcgccg
cccgcgtcgggcgaggcccggcgcttgctccgcgaggtgttcgggcacccggcgttccgg
ccagggcagggagagatagtctcggcggtgctgtcgggccgcgactgcatcggcgtgatg
cccaccggcgcgggcaagtcgctcacgtaccagatcccggcccggctcctgggcggcacg
accctcgtcgtctcaccgctcatcgcgctcatgaaggatcaggtcgacgcgatggcccgc
gtggggcttcgcgcgacgtacctcaactcgacgctgtcggcggaggagcgtcgcgaccgc
gtccgcgcgctccggcagggcgagctcgagctgctctacgcggcgccggaaggcctcgag
gcgtccgtcggcagcgccctcgagggcattcggctgtcgctcatcgccgtcgacgaggcg
cactgcatcagccactggggccacgacttccggcccgcgtaccggaacctcgccggcctg
aaggcgcgcttccgcgcgccggtgctggcgctcacggcgaccgcgacgccggaggtcacg
ggcgacatcgcgtctcagctcgggatgggcgatccgctcgtggtccgcggctcgttcctc
cgccggaacctgcgcatccatgccgcgaagaagggcgagggcctgcggacgcgggacgcg
ctcctcgggttcgtcagggcccgccgcggccaggcgggcatcgtctacgcgctgtcgagg
aagtcggtcgaggagacggcggagctcctcgcggagaacggggtgcgcgcggaggcgtac
cacgccggcctggagccggacgtccgctcccgcgtccaggacgctttccaggccggcaag
atcgacgtggtcgtggcgaccgtcgcgttcgggatgggcatcgacaagcccgacatccgg
ttcgtgctgcaccgcgatctaccgcggtccgtcgaggcgtactaccaggagatcgggcgc
gccggccgcgacggcaacccgagcacatgcctcctcctctactcgtgggcggacgtcatg
agctgggaccggatgctcgacgactccgacgcggagctcgcggacggacagcgccgccag
gcccggtcgatgttccggttcgcggacgagggcggctgccggcacgagcggctcgtcggc
cacttcggagaggtcgcggatccctgcggcgacgcgtgcgatcactgcaccggcgacgac
gtcctcgcgtcggcgatggcgtccgcgcgcggcgcgggcggtggacgccggcggcgcgcc
gaccggtcgcggcgggaggcccgcgagggccgcgagggaccggagacggcggaggcggac
gtggcgctcttcgaggcgctccgggaatggcgcgccggcgaggcgcggtcccgcggcgtc
ccggcgttcgtcgtcttctcggacgcgacgctcgcggagctcgcgcgcgctcgaccggtc
acggaggacgcgctcctcgaagtgaagggcgtcgggccgaagaagctcggggagtacggc
gacgcgctgctcgcgatcctgcgcgaggcggagtag
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integrated database retrieval system
