Anaeromyxobacter oryzae: AMOR_44770
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Entry
AMOR_44770 CDS
T08524
Symbol
rhlE
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aory
Anaeromyxobacter oryzae
Pathway
aory03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aory00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMOR_44770 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aory03019
]
AMOR_44770 (rhlE)
Enzymes [BR:
aory01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AMOR_44770 (rhlE)
Messenger RNA biogenesis [BR:
aory03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMOR_44770 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDG05481
LinkDB
All DBs
Position
complement(5186868..5188265)
Genome browser
AA seq
465 aa
AA seq
DB search
MTTFRDLKLSEKILHALERAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPI
VERLAARPGRPGPRALVLAPTRELAVQIEEQLERFGKTLHVRGALVIGGVGMGNQTRTLR
EHEVVVATPGRLVDHLQQGTARLDGIEVLVLDEADRMLDMGFKPQLTRILSRLPKVRQTL
LFSATMAGEVADFARAHLRDPAKVEVARSGTTAERAEQQVFHPGQHEKLPLLLALLEDDE
LSTLVFTRTKRRADKVAKVLQRAGHKVARIHADRSQAQRRMALDGFKDGTYRVLVATDIA
ARGIDVAEIGHVVNFDLPHVPEDYVHRVGRTARMAASGRASSFASPEELPLLRDIEGLTR
KALPKVEVPRDRATFQAELKRSAEAQASPGAGAQPAGFNRNRRRAAAHNARRGGGGGGGA
ARASGAASGGGHAARGGGHAPQGGGAAGGSAKPKLVGSWGGKRRR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgaccacgttcagagacctgaagctctccgagaagatcctgcacgccctcgagcgcgcc
ggcttcgagcaccccaccccgatccaggcgcaggcgatcccgccggccctcgccggcaag
gacgtcatcggcaccgcggccaccggcaccggcaagaccgccgcgttcctcctccccatc
gtcgagcggctcgcggcgcgccccgggcggccggggccgcgcgcgctcgtgctcgcgccg
acccgcgagctcgcggtccagatcgaggagcagctcgagcggttcgggaagacgctccac
gtccgcggcgcgctcgtcatcggcggcgtcgggatgggcaaccagacgcgcacgctccgc
gagcacgaggtcgtcgtcgccacgcccggccgcctcgtcgatcacctgcagcagggcacc
gcccgcctcgacgggatcgaggtcctcgtgctcgacgaggccgaccgcatgctggacatg
gggttcaagccgcagctcacgcggatcctgtcccggctaccgaaggtccgccagacgctg
ctcttctccgccacgatggcgggcgaggtcgccgacttcgcgcgcgcccacctgagggat
cccgcaaaggtcgaggtggcgcgcagcgggacgaccgcggagcgcgccgagcagcaggtc
ttccaccccgggcagcacgagaagctgccgctcctcctcgcgctgctcgaggacgacgag
ctctcgaccctcgtcttcacccgcacgaagcgccgcgccgacaaggtggcgaaggtgctc
cagcgcgccggccacaaggtcgcgcggatccacgcggaccgctcccaggcgcagcgccgg
atggcgctcgacggcttcaaggacgggacgtaccgggtgctcgtcgcgacggacatcgcc
gcccgcgggatcgacgtcgccgagatcgggcacgtcgtgaacttcgacctgccgcacgtg
cccgaggactacgtccaccgcgtgggccggaccgcgcgcatggccgcgagcgggcgggcc
tcgagcttcgcctcgcccgaggagctgccgctcctcagggacatcgagggcctcacgcgg
aaggcgctgccgaaggtggaggtgccgcgcgaccgcgcaacgttccaggccgagctgaag
cgcagcgccgaggcgcaggcgagccccggcgccggagcccagcccgccggcttcaaccgg
aaccggcgccgcgctgcggcgcacaacgcccggcgcggtggcggtggcggaggcggagcc
gcgcgcgcgagcggcgccgcgagcggcggtgggcacgcggcgcgcggcggtgggcacgcg
ccgcagggtggcggcgccgcgggtggctcggcgaagccgaagctcgtcggttcctggggc
gggaagcggcggcggtag
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