Anaeromyxobacter oryzae: AMOR_47960
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Entry
AMOR_47960 CDS
T08524
Symbol
nifA
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
aory
Anaeromyxobacter oryzae
Pathway
aory02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aory00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AMOR_47960 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aory03000
]
AMOR_47960 (nifA)
Transcription factors [BR:
aory03000
]
Prokaryotic type
Helix-turn-helix
Other families
AMOR_47960 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
Mg_chelatase
GAF_3
AAA_16
bpMoxR
AAA_30
AAA_2
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
BDG05800
LinkDB
All DBs
Position
5533446..5535104
Genome browser
AA seq
552 aa
AA seq
DB search
MLWPPGVEPRRADLETEALHEITRVLAYSADLNKALTSVLHVLRLVLGMENGTVSLFDPV
TGEVFIEAAPEMADAERILGRLRPGEGIVGRIFQAGMPMVVPDVGAEPLFLNRTGSWRNL
EEEPRAFLGVPVRDARATLGVLTVDRRHREGPISFDRDLRLLAIVAGMIGSRVRLQQLQD
PMHRAGAEERTAPPTASEPQPGIVTASARMLGILETLARVAQSRATVLLRGESGTGKELF
ARAVHDASPRAARPFVAVNCAAIPEQLAESELFGHEKGAFTGATAAQKGRFELADGGTLF
LDEIGELPLAAQAKLLRVLQERQFERLGGRRPVTVDVRLVAATNRDLEDAVRQGAFRLDL
YHRISVVTVMLPALRERPEDVVPLVDHFLRQLNEENGRHVRLASDAVEEMRRCRWSGNVR
QLRNCVERIVVSTAREVVGVEDLACAGCLLETLDAPREVARPAPPTLAPVASSPAPAPSS
EAPPASPPPPGSGEDPDASGDDGPAPAGERERIAEALARTGFVQAKAARLLGMTVRQLGW
RIRKYGITMQRY
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
ttgctttggccacccggggtggagccccggcgcgccgatctcgagaccgaggccctccac
gagatcacccgcgtcctcgcctactcggccgacctcaacaaggcgctcacctccgtgctg
cacgtgctccggctcgtgctcgggatggagaacggcaccgtctcgctgttcgacccggtc
accggcgaggtcttcatcgaggcggcgccggagatggccgacgcggagcggatcctcggc
aggctgcgtccgggggaggggatcgtcggccggatcttccaggcggggatgccgatggtc
gtgcccgacgtcggcgccgagccgctgttcctgaaccgcaccgggagctggcgcaacctc
gaggaggagccgcgcgcgttcctcggcgtccccgtccgcgatgcccgcgcgacgctcggc
gtgctcacggtcgaccggcgccaccgcgagggtcccatctccttcgatcgggacctccgg
ctgctcgcgatcgtggccgggatgatcgggagccgcgtgcggctccagcagctccaggat
cccatgcaccgcgccggcgcggaggagcggacggcgccccccaccgcgagcgagccccag
cccgggatcgtgaccgccagcgcgcgcatgctcggcatcctcgagacgctcgcgcgcgtc
gcgcagagccgcgcgacggtcctcctccgcggcgagagcgggaccggcaaggagctgttc
gcccgcgcggtccacgacgcgagcccccgcgccgcgcggccgttcgtggccgtgaactgc
gccgcgatcccggagcagctcgcggagagcgagctgttcggccacgagaagggcgcgttc
accggcgccaccgccgcgcagaagggtcggttcgagctcgccgacggcgggacgctcttc
ctggacgagatcggcgagctgcccctcgcggcgcaggcgaagctcctgcgcgtgctgcag
gagcgccagttcgagcggctcggcgggcgcaggccggtcacggtggacgtgcgcctcgtg
gcggcgacgaaccgggacctcgaggacgcggtccggcagggcgcgttccgcctcgacctg
taccaccgcatctcggtggtgacggtgatgctcccggcgctccgcgagcggccggaggac
gtcgtgccgctcgtcgaccacttcctgcgccagctgaacgaggagaacgggcgccacgtg
cggctcgcctccgacgccgtcgaggagatgcgccgttgccggtggtctgggaacgtccgg
cagctccggaactgcgtcgagcggatcgtcgtctcgacggcgcgcgaggtcgtcggcgtc
gaggacctcgcctgcgcggggtgcctcctcgagacgctcgacgcgccgcgggaggtcgcg
cgcccggcgccgccgacgctcgccccggttgcctcctcgcccgcgcccgccccctcctcg
gaggcgccgcccgcgtcgccgccgccgccggggtctggcgaggacccggacgcgagcgga
gacgacggcccggcgcccgcgggggagcgcgagcgcatcgccgaggcgctcgcgcggacc
gggttcgtgcaggcgaaggcagcgcgcctgcttgggatgaccgtccgccagctcggctgg
cggatccgcaagtacggcatcaccatgcagcgctactga
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