Anaeromyxobacter oryzae: AMOR_49240
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Entry
AMOR_49240 CDS
T08524
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aory
Anaeromyxobacter oryzae
Brite
KEGG Orthology (KO) [BR:
aory00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aory03032
]
AMOR_49240 (topA)
03400 DNA repair and recombination proteins [BR:
aory03400
]
AMOR_49240 (topA)
Enzymes [BR:
aory01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMOR_49240 (topA)
DNA replication proteins [BR:
aory03032
]
Prokaryotic type
DNA Topoisomerases
AMOR_49240 (topA)
DNA repair and recombination proteins [BR:
aory03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMOR_49240 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
BDG05928
LinkDB
All DBs
Position
5676660..5679221
Genome browser
AA seq
853 aa
AA seq
DB search
MPKEPRTVAREGAKKARAVAAPKARRAKAAPVEADVAAIDVEALEAGGAEADAAAPKSPK
RGSRKVTLSGSLVVVESPAKAKTIKKYLGRGYDVKASVGHVKDLPKSKIGVDVAKGFLPE
YEAIKGKAKVLSDIKRAARTAEHVFLATDPDREGEAIAWHIAEELGAEGGDGRVRRVLFN
EITKGAIQKAIASPLDLDRKKFDAQQARRILDRLVGYQISPILWKKVRRGLSAGRVQSVA
VRLVVEREREIEAFVPVEYWSLDADLAAKLPPEFRAKLSKVDGQKADLKDGAQTGALVKD
LEGARYVVASVEKKERRRNPPPPFTTAKLQQEAANRLGFSPKKTMTLAQRLYEGVELGEE
GAVGLITYMRTDSVRLSTEAVDAVRKHIESAFGKDHLPETPNFYKTKAKSAQEAHEAVRP
TSLDWTPDRVAPFFDQMNERDMYRLYELIWNRFVACQMVPAVYDQTTADITAARATFRAT
GSILKFPGYLAVYGAKPPEEEAGAEEEKGGENGEKEARSEDRQLPPLEQGMELRLVKLVP
EQHFTQPPPRFNESSLVKEMEERGIGRPSTYAAILDTIQEKGYVEKLEKQFKPTHLGVLV
TDELVRAFPREMDIAFTAGMEEKLDEIEEGDAGWQAVLTDFYDKFKEDLAKAEEAMRNVK
AQAIETDITCEKCGERKMVIKWGRNGEFLACPGYPECRNTMNFRREDGNIVPEKEEDVPV
EDKCPECGAPMVMKRGRFGKFLACTRYPECKGTKPVSIGVSCPKGCGGYITEKRSRRGKT
FYGCSSYPKCDFVSWDRPRNEACPQCGSAYLLDKYSKKTGPFVACPNKECGYRREAEPRP
EGEAAPAPTLEKV
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggagccgaggacggtggcacgcgagggcgcgaagaaggcgagggcggtggcc
gcgccgaaggcgcgccgcgcgaaggccgccccggtcgaggccgacgtggccgcgatcgac
gtcgaggccctcgaggcaggcggcgccgaggcggacgccgccgcgccgaagagcccgaag
cggggatcccggaaggtcaccctgagcggcagcctcgtggtggtcgagtcgcccgcgaag
gcgaagacgatcaagaagtacctgggccgcggctacgacgtgaaggcgtccgtcgggcac
gtgaaggacctgccgaagtccaagatcggcgtcgacgtcgcgaagggcttcctccccgag
tacgaggccatcaaggggaaggcgaaggtcctctcggacatcaagcgcgccgcgcggacc
gccgagcacgtcttcctcgcgaccgaccccgatcgcgagggagaggcgatcgcctggcac
atcgcggaggagctcggcgccgaaggcggcgacgggcgcgtccgccgcgtcctcttcaac
gagatcacgaagggcgcgatccagaaggcgatcgcgagcccgctcgacctcgatcgcaag
aagttcgacgcccagcaggcccgccggatcctcgaccggctggtcgggtaccagatcagc
ccgatcctctggaagaaggtccgccgcggcctctccgcgggccgggtccagtccgtcgcg
gtgcgcctcgtcgtcgagcgcgagcgcgagatcgaggcgttcgtcccggtcgagtactgg
tcgctggacgcggacctggccgcgaagctgccgccggagttccgcgccaagctctcgaag
gtcgacggccagaaggccgacctgaaggacggcgcgcagacgggcgccctcgtgaaggac
ctcgagggcgcgcggtacgtcgtcgcgtccgtggagaagaaggagcgccgccggaatccg
ccgccgcccttcaccaccgcgaagctgcagcaggaggcggcgaaccggctcggcttcagc
ccgaagaagacgatgaccctggcgcagcgcctctacgagggcgtggagctgggcgaggag
ggcgcggtcggcctcatcacgtacatgcgcaccgactccgtccggctctccaccgaggcg
gtggacgcggtccgcaagcacatcgagtcggcgttcgggaaggaccacctcccggagacg
ccgaacttctacaagacgaaggcgaagtcggcgcaggaggcgcacgaggcggtgcgcccg
acctccctcgactggacgccggaccgcgtggcgccgttcttcgaccagatgaacgagcgc
gacatgtaccggctctacgagctcatctggaaccggttcgtcgcctgccagatggtgccg
gcggtctacgaccagaccaccgcggacatcaccgcggcccgcgcgacgttccgcgcgacg
ggctcgatcctcaagttccccggctacctcgccgtgtacggcgcgaagccgcccgaggag
gaggccggcgccgaggaggagaagggcggcgagaacggcgagaaggaggcgcggtccgag
gatcgccagctcccgccgctcgagcaggggatggagctgcgcctcgtgaagctcgtcccc
gagcagcacttcacgcagccgccgccgcgcttcaacgagtcgtccctcgtgaaggagatg
gaggagcgcggcatcgggcgcccgtccacgtacgcggccatcctcgatacgatccaggag
aagggctacgtcgagaagctcgagaagcagttcaagccgacgcacctcggcgtgctcgtg
accgacgagctcgtccgcgccttcccccgcgagatggacatcgcgttcaccgcggggatg
gaggagaagctggacgagatcgaggagggggacgccgggtggcaggcggtcctcacggac
ttctacgacaagttcaaggaggacctcgccaaggccgaggaggccatgcgcaacgtgaag
gcgcaggccatcgagaccgacatcacgtgcgagaagtgcggcgagcggaagatggtcatc
aagtggggccggaacggcgagttcctcgcctgccccggataccccgagtgccggaacacg
atgaacttccggcgcgaggacgggaacatcgtcccggagaaggaggaggacgtccccgtc
gaggacaagtgcccggagtgcggcgcgccgatggtgatgaagcgcggccggttcgggaag
ttcctcgcctgcacccgctaccccgagtgcaagggcacgaagccggtgtcgatcggcgtg
tcgtgcccgaagggctgcggcggctacatcacggagaagcgctcccggcgcggcaagacc
ttctacggctgctcgtcgtacccgaagtgcgacttcgtgagctgggatcggccgcggaac
gaggcgtgcccgcagtgcgggagcgcgtacctcctggacaagtactcgaagaagacgggg
ccgttcgtcgcctgcccgaacaaggagtgcggctaccgccgcgaggcggagccgcgcccc
gagggcgaggcggcgccggcgccgacgctcgagaaggtctag
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