Anaeromyxobacter oryzae: AMOR_51170
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Entry
AMOR_51170 CDS
T08524
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aory
Anaeromyxobacter oryzae
Pathway
aory03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aory00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMOR_51170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aory03019
]
AMOR_51170
03009 Ribosome biogenesis [BR:
aory03009
]
AMOR_51170
Enzymes [BR:
aory01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AMOR_51170
Messenger RNA biogenesis [BR:
aory03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMOR_51170
Ribosome biogenesis [BR:
aory03009
]
Prokaryotic type
rRNA helicases
AMOR_51170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DbpA
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BDG06121
LinkDB
All DBs
Position
5880575..5882527
Genome browser
AA seq
650 aa
AA seq
DB search
MGGAPVVAPSDYVAETSFDDLGLSEGVRRAIAERGYQKPTPVQAATYRPLRDGKDVIVRS
KTGTGKTAAFAIPLLERIPEGRRKPSALVMCPTRELALQVAEEFAALAKHRDLSVVAIYG
GASMGEQLAKLEAGAEIVVGTPGRIYDHIRRRTLNLDAAMACCLDEADEMLNMGFFEEVT
RILDHLPDDCQQLLFSATVPADIEQIIHKYLTDPETILLSGDEYTVENIHNVMYPTVDAY
PKPRNLLYMLEIEEPETAIVFCNTRSDTSLVTAVLNRNGFDAELLNGDLPQKERERVMAK
VKRGEVRFMVATDIAARGIDISDLSHVINYSLPEDPAVFLHRVGRTGRIGKKGTSLSLVS
GAEIHTLTALQKKFGISFEQKALPTPEEARKVWTERHVGELKEAMSASIFEAFIPLSQEL
RNRPDGEYLVAFALKYFFTHHRIEKMTDLQKAEHKREEHERREKIEQREAKPEQGRGRRG
RGRDEGREGRSRDREAPREAREGEARDGERARSGERGRDGEGRRRRGRDERRPEEPRGER
TPTVEVAAAEAGAAGNGAAVEVAAEAASERPGRGRVFVTLGEADGVDAGKVREAVGSLAP
GVELEGVEVRRTHSFVEVKPDAVEGLVAALDGKDWNGKKLAAERARRRRR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggcgcccgtggtggcgccctcggattacgtcgcagagacctccttcgacgac
ctcgggctttcggaaggggtgcgccgcgcgatcgcggagcgcgggtaccagaagcccacg
ccggtgcaggccgccacgtaccggccgctccgggacggcaaggacgtcatcgtccggtcg
aagacgggcaccgggaagacggccgccttcgcgatcccgctgctcgagcgcatccccgag
ggccggcggaagccctcggcgctggtgatgtgcccgacgcgcgagctggcgctgcaggtg
gcggaggagttcgccgccctcgcgaagcaccgcgacctctcggtcgtggcgatctacggc
ggcgcgtcgatgggcgagcagctcgcgaagctcgaggccggcgcggagatcgtcgtcggc
acgccgggccggatctacgaccacatccgccggcggacgctgaacctcgacgcggcgatg
gcctgctgcctcgacgaggcggacgagatgctgaacatgggcttcttcgaggaggtgacg
cgcatcctcgatcacctgcccgacgactgccagcagctgctcttctccgcgacggtgccc
gcggacatcgagcagatcatccacaaatacctcaccgatccggagacgatcctgctctcc
ggcgacgagtacaccgtcgagaacatccacaacgtgatgtacccgacggtcgacgcgtac
ccaaagccccggaacctcctctacatgctggagatcgaggagccggagaccgcgatcgtg
ttctgcaacacccggagcgacacctcgctcgtcaccgcggtgctgaaccggaacggcttc
gacgcggagctcctgaacggggacctgccgcagaaggagcgcgagcgggtgatggcgaag
gtgaagcggggcgaggtccgcttcatggtggcgaccgacatcgccgcgcgcggcatcgac
atctccgacctgtcccacgtcatcaactactccctgcccgaggacccggcggtgttcctg
caccgcgtcggtcgcaccggccgcatcggcaagaagggcacgagcctctcgctcgtctcg
ggcgccgagatccacacgctcaccgcgctccagaagaagttcgggatctcgttcgagcag
aaggcgctcccgacgccggaggaggcgcggaaggtctggaccgagcgccacgtcggcgag
ctgaaggaggcgatgagcgcgtcgatcttcgaggcgttcatcccgctctcgcaggagctg
aggaaccgcccggacggcgagtacctcgtcgccttcgcgctcaagtacttcttcacgcac
caccgcatcgagaagatgacggacctgcagaaggccgagcacaagcgcgaggagcacgag
cgccgcgagaagatcgagcaacgcgaggcgaagccggagcaaggccgcggccggcgcggc
cgcggtcgtgacgaggggcgcgaggggcggagccgcgatcgcgaggcgccgcgcgaggcc
cgcgagggcgaggcgcgcgacggcgagcgtgcccggagcggggagcgcgggcgcgacgga
gagggccgccgccggcgggggcgcgacgagcgtcgtcccgaggagcctcggggcgagcgg
acgccgacggtcgaggtcgccgccgcggaggccggggccgccggcaacggcgccgcggtg
gaggtcgccgcggaggcggcgtccgagcgcccgggccgcgggcgggtgttcgtgaccctc
ggcgaggccgacggcgtggacgccgggaaggtgcgcgaggcggtcgggtcgctcgcgccc
ggcgtcgagctcgagggcgtcgaggtccggcgcacccacagcttcgtggaagtgaagccg
gatgcggtcgagggcctggtcgccgcgctcgacggcaaggactggaacgggaagaagctc
gccgccgagcgggcgcgccggcgccgccgctag
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