Anaeromyxobacter oryzae: AMOR_54000
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Entry
AMOR_54000 CDS
T08524
Symbol
comEB
Name
(GenBank) putative late competence protein required for DNA binding
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
aory
Anaeromyxobacter oryzae
Pathway
aory00240
Pyrimidine metabolism
aory01100
Metabolic pathways
aory01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
aory00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AMOR_54000 (comEB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aory02044
]
AMOR_54000 (comEB)
Enzymes [BR:
aory01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
AMOR_54000 (comEB)
Secretion system [BR:
aory02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
AMOR_54000 (comEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Inv-AAD
SNAD4
Bd3614-deam
APOBEC_N
NAD1
APOBEC2
Motif
Other DBs
NCBI-ProteinID:
BDG06404
LinkDB
All DBs
Position
6191964..6192458
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AA seq
164 aa
AA seq
DB search
MDGRVSWDEYFMNIARVVATRATCDRKHVGAVLVRDKTILSTGYNGSIRGLPHCTEAGHM
MEDGHCVATVHAEANAIIQAAKNGVAVEGATIYTTASPCWPCFKLIANTGCRRIVFGEFY
RDARIFEFAQRLGIELVELKVPARPDVQPADTGAPRQVTAPRTE
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggacggacgcgtcagctgggacgagtacttcatgaacatcgcgcgggtcgtcgcgacg
cgcgcgacctgcgatcggaagcacgtcggcgccgtcctcgtgcgcgacaagaccatcctg
tccacgggctacaacggctccatccgcggcctgccgcactgcaccgaggccggccacatg
atggaggacgggcactgcgtcgcgaccgttcacgcggaggcgaacgcgatcatccaggcc
gccaagaacggcgtcgccgtggagggggcgacgatctacacgaccgcctcgccctgctgg
ccgtgcttcaagctcatcgcgaacaccgggtgccggcgcatcgtgttcggcgagttctac
cgggatgcgcgcatcttcgagttcgcgcagcgcctcgggatcgagctcgtcgagctgaag
gttcccgcgcggccggacgtccagccggcggacaccggcgccccccgtcaggtcacggcg
cctcggaccgagtga
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