KEGG   Actinomyces oris: AXE84_00410
Entry
AXE84_00410       CDS       T04280                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
aos  Actinomyces oris
Pathway
aos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AXE84_00410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aos03019]
    AXE84_00410
Messenger RNA biogenesis [BR:aos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AXE84_00410
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AME00102
UniProt: A0AAE4G287
LinkDB
Position
complement(98689..100323)
AA seq 544 aa
MRITPLGGLGEVGRNMTVFELDGKLLIVDCGVLFPEEDQPGVDLILPDFSSIEHRIDDVV
ALVLTHGHEDHIGGVPYLLRLREDIPLVGSELTLAFVEAKLKEHRIRPVLRQVVEHEEVS
YGPFDLEFVAVNHSIPDAMAVMIRTDAGNVLATGDFKMDSLPIDGRITDLRSFARFGEEG
VDLFCVDSTNAEVPGMVGHEGEIGQVLDNVFADSDGQIVVASFASHVHRVQQVLDAAALH
DRRVALVGRSMVRNMGIAAERGYLKVPAGVLIDARDITSLPPHERVLMVTGSQGEPMAAL
SRMAHSEHRSVTIEPGDTVIFASSLIPGNENSVFRVINQLMRLGARVVHQGNAKVHVSGH
ASSEELLHVYNIVQPRNVMPIHGEIRHLVANGGLAVKTGIAPERVMLCEDGVAVDLEGGV
ARIAGQVPCGYIYVDGSSVGEIDEAELKDRRILAEEGFVSVYAVVETTTGTILAGPHIQA
RGVAEDDSVFEEILPDVTEALSAALETGKADAYSLQQVMRRTLGRWIGRRLRRRPMIVPV
VIEA
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgcgcatcactcccctggggggcctgggcgaggtcggccgcaacatgaccgtcttcgag
ctggacggcaagctgcttatcgtcgactgcggtgtgctcttccccgaggaggaccagccg
ggtgtcgacctcatccttcctgacttctcctccatcgagcaccgcatcgacgacgtcgtc
gccctggtcctgactcacgggcacgaggaccacatcgggggtgtgccctatctgctgcgc
ctgcgtgaggacatccccttggtgggaagcgagctcacgctggccttcgtggaggccaag
ctcaaggagcaccgtatccgtccggtgctgcgtcaggtcgtcgagcacgaggaggtctcc
tacggccccttcgacctggagttcgtggccgtcaaccactccatccccgacgccatggcc
gtcatgatccgcaccgatgccggcaacgtgctggccaccggtgacttcaagatggactcc
ctgcccatcgacgggcgcatcacggacctgcgctccttcgcccgtttcggtgaggagggc
gtggacctgttctgcgtggactccaccaacgccgaggtcccgggcatggtgggccacgag
ggcgagatcggccaggtcttggacaacgtcttcgccgactccgacgggcagatcgtcgtg
gcctccttcgccagccacgtccaccgtgtccagcaggtcctcgacgccgccgccctgcac
gacaggcgggtcgccctcgtggggcgctccatggtgcgcaacatggggatcgccgccgag
cgcggctacctcaaggtccccgcaggtgtcctcatcgatgcccgggacatcacctcgctg
cccccgcacgagagagtcctcatggtcaccggctctcagggagagcccatggcggccctg
tcccggatggcccactccgagcaccgcagcgtcaccatcgagcccggggacaccgtcatc
ttcgcctcctccctcatccccggcaacgagaactccgtcttccgggtcatcaaccagctc
atgaggctgggggcacgcgtggtccaccagggcaacgccaaggtccacgtctccgggcac
gcctcctccgaggagctgctccacgtctacaacatcgtccagccccgcaacgtcatgccc
attcacggtgagattcgtcatctggtggctaatggtgggctcgccgtcaagacgggaatc
gccccggaacgggtcatgctgtgcgaggacggcgtggccgtcgacctggagggtggagtg
gcccgtatcgccggccaggtgccctgcggctacatctacgtcgacggctcctcggtgggg
gagatcgacgaggccgagctcaaggaccgccgcatcctggcggaggagggcttcgtctcg
gtctacgccgtggtggagaccacgaccggcacgatcctggccggcccccacatccaggcg
cggggcgtggcggaggacgactcggtcttcgaggagattcttcccgatgtgaccgaggcc
ctgtcggctgcgctggagaccgggaaggcggacgcctactccctccagcaggtcatgcgc
cgcaccctggggcgctggatcgggcgccgcctcaggcgccgtcccatgatcgtcccggtc
gtcatcgaggcatag

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