Actinomyces oris: AXE84_00410
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Entry
AXE84_00410 CDS
T04280
Name
(GenBank) ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aos
Actinomyces oris
Pathway
aos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXE84_00410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aos03019
]
AXE84_00410
Messenger RNA biogenesis [BR:
aos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AXE84_00410
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AME00102
UniProt:
A0AAE4G287
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All DBs
Position
complement(98689..100323)
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AA seq
544 aa
AA seq
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MRITPLGGLGEVGRNMTVFELDGKLLIVDCGVLFPEEDQPGVDLILPDFSSIEHRIDDVV
ALVLTHGHEDHIGGVPYLLRLREDIPLVGSELTLAFVEAKLKEHRIRPVLRQVVEHEEVS
YGPFDLEFVAVNHSIPDAMAVMIRTDAGNVLATGDFKMDSLPIDGRITDLRSFARFGEEG
VDLFCVDSTNAEVPGMVGHEGEIGQVLDNVFADSDGQIVVASFASHVHRVQQVLDAAALH
DRRVALVGRSMVRNMGIAAERGYLKVPAGVLIDARDITSLPPHERVLMVTGSQGEPMAAL
SRMAHSEHRSVTIEPGDTVIFASSLIPGNENSVFRVINQLMRLGARVVHQGNAKVHVSGH
ASSEELLHVYNIVQPRNVMPIHGEIRHLVANGGLAVKTGIAPERVMLCEDGVAVDLEGGV
ARIAGQVPCGYIYVDGSSVGEIDEAELKDRRILAEEGFVSVYAVVETTTGTILAGPHIQA
RGVAEDDSVFEEILPDVTEALSAALETGKADAYSLQQVMRRTLGRWIGRRLRRRPMIVPV
VIEA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcactcccctggggggcctgggcgaggtcggccgcaacatgaccgtcttcgag
ctggacggcaagctgcttatcgtcgactgcggtgtgctcttccccgaggaggaccagccg
ggtgtcgacctcatccttcctgacttctcctccatcgagcaccgcatcgacgacgtcgtc
gccctggtcctgactcacgggcacgaggaccacatcgggggtgtgccctatctgctgcgc
ctgcgtgaggacatccccttggtgggaagcgagctcacgctggccttcgtggaggccaag
ctcaaggagcaccgtatccgtccggtgctgcgtcaggtcgtcgagcacgaggaggtctcc
tacggccccttcgacctggagttcgtggccgtcaaccactccatccccgacgccatggcc
gtcatgatccgcaccgatgccggcaacgtgctggccaccggtgacttcaagatggactcc
ctgcccatcgacgggcgcatcacggacctgcgctccttcgcccgtttcggtgaggagggc
gtggacctgttctgcgtggactccaccaacgccgaggtcccgggcatggtgggccacgag
ggcgagatcggccaggtcttggacaacgtcttcgccgactccgacgggcagatcgtcgtg
gcctccttcgccagccacgtccaccgtgtccagcaggtcctcgacgccgccgccctgcac
gacaggcgggtcgccctcgtggggcgctccatggtgcgcaacatggggatcgccgccgag
cgcggctacctcaaggtccccgcaggtgtcctcatcgatgcccgggacatcacctcgctg
cccccgcacgagagagtcctcatggtcaccggctctcagggagagcccatggcggccctg
tcccggatggcccactccgagcaccgcagcgtcaccatcgagcccggggacaccgtcatc
ttcgcctcctccctcatccccggcaacgagaactccgtcttccgggtcatcaaccagctc
atgaggctgggggcacgcgtggtccaccagggcaacgccaaggtccacgtctccgggcac
gcctcctccgaggagctgctccacgtctacaacatcgtccagccccgcaacgtcatgccc
attcacggtgagattcgtcatctggtggctaatggtgggctcgccgtcaagacgggaatc
gccccggaacgggtcatgctgtgcgaggacggcgtggccgtcgacctggagggtggagtg
gcccgtatcgccggccaggtgccctgcggctacatctacgtcgacggctcctcggtgggg
gagatcgacgaggccgagctcaaggaccgccgcatcctggcggaggagggcttcgtctcg
gtctacgccgtggtggagaccacgaccggcacgatcctggccggcccccacatccaggcg
cggggcgtggcggaggacgactcggtcttcgaggagattcttcccgatgtgaccgaggcc
ctgtcggctgcgctggagaccgggaaggcggacgcctactccctccagcaggtcatgcgc
cgcaccctggggcgctggatcgggcgccgcctcaggcgccgtcccatgatcgtcccggtc
gtcatcgaggcatag
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