Actinomyces oris: AXE84_03475
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Entry
AXE84_03475 CDS
T04280
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
aos
Actinomyces oris
Brite
KEGG Orthology (KO) [BR:
aos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aos03019
]
AXE84_03475
Enzymes [BR:
aos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AXE84_03475
Messenger RNA biogenesis [BR:
aos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AXE84_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_19
AAA_22
HA2_N
NACHT
T2SSE
nSTAND3
Ldh_1_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMD98596
LinkDB
All DBs
Position
807618..812414
Genome browser
AA seq
1598 aa
AA seq
DB search
MEQGEHLTHNQGDDHADGHHGQQDGDLGARSTENTQASPGGPDGHAADRARGGAPDRQKS
RSPRGGGRRRGRRPGRTEGRRRNAWKGYSPEQLAARTAAVPAIVYPEELPVSARREEIAA
AIGEHQVVIVAGETGSGKTTQLPKICLELGRGVTGMIGHTQPRRIAARSVAERIASELGT
PIGRDGVVGYQVRFTEEVGENTLVKLMTDGILLAEIQSDPQLRRYDTIIVDEAHERSLNI
DFILGYLARLLPERPDLKVIITSATIDSERFAEHFGREQIGDRGQPFTVPAPVIEVSGRT
YPVEVRYRPLAPDDAPPASDDAGSEPAKPAAAPQPGPAGPGELSEAELEALTSPDPAVRA
AARARREAIRSGAGPAALAPRNQGARGKGRGRAASTAAESGEPKDQVTGILDAVDELLGE
PSGDILIFLAGERDIRDTEAALIDHLGARYTPDGRSRTPGAIEVVPLYSRLSAAEQHRVF
EAHQVRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSNRTKVQRLPIEPVSRASANQR
AGRCGRVADGIAIRLYSQADFEARPEYTEPEILRTSLASVILQMAALGLGAVEDFPFLDA
PDSRQVRSGLQLLTEIGAIEPAAAAPTRSDDAPDRGRRGPRLTEIGRRLARLPIDPRLGR
MLLEAGELGCVGEVMVIVAALSIQDVRERPADKQEASDALHRRFADPTSDFLTYLNLWRY
LRTQSRELSGSAFRRMCRAEFLHYLRVREWQDVHAQLRQLARPLGLDAAPVELPTARSIR
AATEALEPGSHAAQIANGGVAAAVVALGRSADTPDADAIHRSLLVGLLSNVGNWDERRRE
YAGARGTRFTIWPGSGLRRKTYDWVMTAELVETSRLFARTVGKVDSRWIEQVADRAGLTR
HVFGEPYWSTRQGAAMVHEKVLLYGMTLVADRPATLASVGTDSARQVAREMFIRSGLVEG
GWHARHGFVERNRELIEELQDVERRRREHGLLADDTALFDFYDDRIPEEVTSAAAFDAWW
KEQRRTTPDLLDFTRELLLPGGGDASGFPDTWVQGDLTLGLDYVFEPGHPEDGVSVQVPV
EVLGRLAPEGFDWLVPGMRPELCVATIRALPKRVRRQLVPAPDVGAQVWAQIAQEFPTPP
GASCPEVPFEEAFSRVVLRLKGVEITEEDWAEAAERLPDHLAMGFAALDAQGRVIGRGRD
LVALQQRLSGKTEAAVRSVVRGALAQAMAEAQERQGAQGGKPGRKGRKKKGGRPAAAQRP
GGAAGTAGGSGAGTGAAAGGGAGLEERQGLTDWPRGVSGLGDPGASTIPASVESAGRAGL
VVRGYPALVANGTRSVDLRILPDAAAQLSAHGAGVTALALARTALPTARVTSRWSAQESL
ILAASPYRTTEALVEDVQAAAARIVAGRWAASASGCALAEVRRREVFEALVGVMRSELEE
EVYRVARYAAAALKAAREVERVVGEHTSLTLLNTLQEVREHAASLVPEGFITATPPEHLA
HLERYLRALEMRVEKAASSPSAASQDAALAFQVSQAREVVDKARAKAASLPADPQREALL
EEARWMVEELRVSLFAQTLGTSRKVSLQRITKLCAQIA
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggaacagggcgagcacctcacgcacaaccagggcgacgatcacgccgatggacatcac
ggccagcaggacggcgatctcggcgcgcgcagcaccgagaacactcaggcgtcccctggc
gggccggacgggcacgccgccgatcgtgcgcggggcggcgccccggaccgccagaagtca
cgatccccgcgcggtggcggcaggcgtcggggccggcgcccgggccgcaccgagggcagg
cgccgcaacgcctggaagggctactcccccgagcagctcgccgcccgcaccgccgccgtc
ccggcgatcgtctaccccgaggagctgccggtctccgcccgccgtgaagagatcgccgcc
gccatcggtgagcaccaggtcgtcatcgtcgccggtgagaccggcagcggtaagaccacc
cagctgcccaagatctgcctggagctggggcggggcgtgaccgggatgatcggccacacc
cagccgcggcgcattgccgcgcgcagcgtggccgagcgcatcgcctccgagctgggcacc
ccgatcggacgtgacggcgtcgtcggctaccaggtgcgtttcaccgaggaggtaggcgag
aacaccctggtcaagctcatgaccgacggcatcctgctggcggagatccagtccgacccc
caattgcgccgctatgacacgatcatcgtggacgaggcccacgagcgcagcctcaacatc
gacttcatcctgggctacctggcgcgcctgttgcccgagcgccccgacctcaaagtcatc
atcacttcggccaccatcgactccgagcgcttcgccgagcacttcggccgcgagcagatc
ggcgaccgcgggcagcccttcaccgttcccgccccggtcatcgaggtctccgggcgcacc
taccccgttgaggtgcgctaccgcccgctggctcccgacgacgcccctcctgcctccgac
gacgccggcagcgagccggccaagcccgccgccgcgccccagcccggcccggcgggaccc
ggagagctgagcgaggccgagctggaggccctgacctcgcctgacccggcggtgcgcgcc
gcggcccgggcccgccgcgaggccatccgctccggcgccggccccgccgcgctcgcgccc
cgcaaccagggggctcgtggcaagggccggggccgggccgcctcaacggccgccgagtcc
ggggagcccaaggatcaggtgaccgggatcctcgacgccgtcgacgagctcctgggcgag
cccagcggcgacatcctcatcttcctggccggtgagcgcgacatccgcgacaccgaggcg
gccctcatcgaccatttgggggcgcgctacacgcccgacggccgttcgcgcacgccgggt
gccattgaggtggttcccctgtactcgcgtctgagcgccgccgagcagcaccgggtcttc
gaggcccatcaggtgcgccgcatcgtcctggccacgaacgtggccgagacctccctgacg
gttcccgggatccggtacgtcatcgacccgggcctggcgcgcatctcccgctactccaac
cgcaccaaggttcagcgcctgccgatcgagccggtcagccgggccagcgccaaccagcgg
gcgggccgttgcgggcgcgtggccgacggcatcgccatccgcctgtactcgcaggccgac
ttcgaggcgcgcccggagtacaccgagccggagatcctgcgcacctcgctggccagcgtc
attctgcagatggcggccctggggctgggggcggtggaggacttccccttcctggacgcc
cccgactcccgccaggtccgctccggcctgcagctgctcacggagatcggcgccatcgag
ccggccgcggccgccccgacccgatccgacgacgcccccgaccggggccgtcgggggccg
cgcctgacggagatcgggcggcgcctggcgcgcctgcccatcgacccgcgcctggggcgc
atgctcctggaggccggtgagctgggctgcgtcggggaggtcatggtcattgtggcggcc
ctgtccatccaggacgtgcgcgagcgccctgcggacaagcaggaggcctccgacgccctg
caccggcgcttcgcggacccgacgagtgacttcctgacctacctgaacctgtggcgctac
ctgcgcacacagagccgcgagctgtccggttcggccttccggcgcatgtgccgggccgag
ttcctgcactacctgcgggtgcgcgagtggcaggacgtccacgcccagctgcgtcagctg
gcccgaccgctgggcctggacgcggccccggtggagctgccgacggcccgttcgatccgg
gcggccaccgaggccctggagccgggcagccatgccgcccagatcgccaacgggggtgtg
gcggccgccgtcgtggccctggggcgcagtgcggacacgcccgacgccgatgcgatccac
cgctcgctgctggtggggctgctgtccaatgtggggaactgggatgagcgtcgtcgggag
tacgccggcgcgcgcgggacccgcttcacgatctggccgggctcgggcctgcgccgcaag
acctacgactgggtgatgaccgccgagctggtggagacctcccggctcttcgcccgcacg
gtgggcaaggtggactcgcggtggatcgagcaggtggcggaccgggcgggcctgacccgc
cacgtcttcggtgagccctactggtcgacccgccagggggcggccatggttcacgagaag
gtgctgctctacgggatgacgctggtggcggaccggccggcgacgctggcgagcgtgggg
acggactctgcccgccaggtggcccgggagatgttcatccgctcgggtctggtggagggc
ggctggcacgcccggcacggcttcgtggagcgcaaccgggagctcatcgaggagcttcag
gacgtggagcggcgtcggcgcgagcacgggctgctggccgacgacaccgccctgttcgac
ttctatgacgaccggatccccgaggaggtgacctccgcagcggccttcgacgcctggtgg
aaggagcagcggcgcaccaccccggacctgctggacttcacccgggagctgctgctgccc
ggcgggggcgacgcgagcggcttcccggacacgtgggtgcagggggacctgaccctggga
ctggactacgtgttcgagccgggccaccccgaggacggggtcagcgtccaggtgccggtg
gaggtactggggcgcctggccccggagggcttcgactggctggtgccggggatgcgcccc
gagctgtgcgtggccacgatccgggcgctgcctaagcgggtgcgccgccagctggtgccg
gccccggacgtgggcgcccaggtgtgggcgcagatcgcccaggagttcccgacgccgccg
ggtgcgagctgccccgaggtgcccttcgaggaggccttcagccgggtggtgctccgcctc
aagggcgtggagatcacggaggaggactgggccgaggcggccgagcggctgccggatcac
ctggcgatgggcttcgcggccctggatgcgcagggccgggtcattggtcgtggccgggac
ctggttgcgctccagcagcggctgtcgggcaagacggaggccgccgtgcgctcagtggtg
cgcggcgcgctggcccaggcgatggccgaggcccaggagcgccagggcgcgcagggcggg
aagcccggccgcaagggccgtaagaagaagggcgggcggccggcggccgcccagcgcccg
ggtggcgccgctgggaccgcaggaggctcaggggccggaactggggccgctgctggaggc
ggcgccggcctggaggagcgccagggactgaccgactggcctcggggtgtgtcgggcctg
ggcgacccgggtgcctcgacgatcccggcctcggtggagtccgcgggccgggccggcctg
gtggtgcgcggctaccccgccctggtggcgaacgggaccaggagcgtggacctgaggatc
ctgcccgacgccgctgcgcagctgagcgctcatggcgccggggtgacggcgctggccctg
gcgcgcacggccttgccgacggcccgggtgacgagccggtggagtgcccaggagtcgctc
atcctggcggccagtccctaccggacgacagaggctctcgtggaggacgtgcaggcggct
gccgcacggatcgtggccgggcgctgggcagcgtcggcctccggctgcgcgctggcggag
gtgcgcaggcgggaggtcttcgaggcgctggtcggtgtcatgcgcagtgagctcgaggag
gaggtctaccgggtggcccggtatgcggcggcggcgctcaaggcggcccgggaggtggag
cgcgtggtgggtgagcacacctctctgacgctgctgaacacgctgcaggaggtacgcgag
cacgcggcctccctggttccggagggtttcatcaccgccaccccgccggagcacctggcg
catctggagcgctacctgcgggccctggagatgcgggtggagaaggcggcctcctcgccg
tcggccgcctctcaggacgcggccctggccttccaggtctcccaggcccgggaggtggtg
gacaaggcccgcgccaaggcggcctcgctgccggccgacccgcagcgtgaggccctcctg
gaggaggcccgctggatggtggaggagctgcgggtgagcctgttcgcccagacgctgggg
acgagccgcaaggtgagcctccagcgcatcaccaagctctgcgcccagatcgcctga
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