Actinomyces oris: AXE84_08005
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Entry
AXE84_08005 CDS
T04280
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aos
Actinomyces oris
Pathway
aos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXE84_08005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aos03021
]
AXE84_08005
03400 DNA repair and recombination proteins [BR:
aos03400
]
AXE84_08005
Enzymes [BR:
aos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXE84_08005
Transcription machinery [BR:
aos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXE84_08005
DNA repair and recombination proteins [BR:
aos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXE84_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AMD99360
LinkDB
All DBs
Position
1963952..1967905
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDANVFDRIQLGLATAEDIRSWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMAHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMVTEVDEEGRHDDLPSLRNELEVKKKHLEESGQAEVEARQQRLEED
LAQLESEGAEASQRDKLRKTAEREITAMRRRNQRALEHMDKVWDRFVSLKVGDLEGDEVL
YRDMVADYGIYFKGSMGAEAIQARLRSFDLEAEASALAEIVENGTGQRKTRAIKRLKVVN
AFRMTGTAPESMVLDNIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
GAPTIIVNNEKRMLQDAVDALFDNGRRGRPVTGVGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPSQMALELFKPFVMKRLVELKEAQNVKAAKRMVERAN
PKVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGTYYLTSDPDPAVEVER
DAEGNEIVPAFSSFAEAVMAYDFGKLHVNAACDIRFEEGIAAPEGWQPPEGWSEGDPITL
RTSLGRALFNTSLPETFPYVNYIVDKKQLGNIVNALAENYSRVEVAASLDALKANGFYWS
TWSGITVAFADVVSPEAKQEILVRYENEAAEIEEQFELGALTEDDRYASLIDIWTKATAE
VAEAMRENFPQRNTVYQMVVSGARGNWDQIRQLAGMRGLVADPKQRLIERPIKSNYREGL
SVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTRKGLTKRIFSW
IDAGDERIKEPSEILGTTVFGTTLARDAIDAEGNLIIEAGADLGDAEIQAAIDAGIEEIT
VRSVLTCDSNVGTCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAA
GAADITQGLPRVQELFEARTPKGEAAVAEAAGTLKIEDDADGKRLVITRDDGEEDVIVPV
SRRQRLLVNDGDHVEPGQALTEGPVDPKKVLRLRSVAATQRHLVEEVQEVYRSQGVDIHS
KHIEVIVRQMLRRVTVLDSGDTRLLQGDLVDVMHYRAENRRVMAEGGKTATGRTELMGIT
KASLATDSWLSAASFQETTRVLTEAAMNGKSDPLLGLKENVILGKLIPAGTGLARYSDIE
VEPTEEVKAEVFSRVDLGDGVFGESVALDDFHFGGDLRADFSDDFRTGFSSSEDVEF
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgccaacgtgttcgacaggatccagctcggcctcgccaccgcggaggacatt
cgctcgtggtcccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaaggggatcgtctgcgagcgctgcggagtc
gaggtcactcgctccaaggtgcgtcgcgagcgcatggcccacatcaagctcgccgcgccg
gtcacccacatctggtacttcaagggcgtgccctcgcgcctgggctacctgctcaacctc
gcgcccaaggacctggagaaggtcatctacttcgcggcctacatggtcaccgaggtggat
gaggagggccgccacgacgacctgccctcgctgcgcaacgagctggaggtcaagaagaag
cacctcgaggagtccggccaggccgaggtcgaggcgcgccagcagcgcctcgaggaggac
ctcgcccagctcgagtccgagggcgccgaggcctcccagcgcgacaagctccgcaagacc
gccgagcgtgagatcacggccatgcgccgccgcaaccagcgcgccctggagcacatggac
aaggtgtgggaccgcttcgtgagcctcaaggtcggtgacctggagggtgacgaggtcctc
taccgcgacatggttgccgactacggcatctacttcaagggctccatgggtgccgaggcc
atccaggcccgcctgcgcagcttcgacctcgaggccgaggcctccgccctggccgagatc
gtcgagaacggcaccggccagcgcaagacccgcgccatcaagcgcctcaaggtcgtcaac
gccttccgcatgactggcaccgccccggagtcgatggtcctggacaacatcccggtcatc
ccgccggacctgcgtcccatggtccagctcgacggcggccgcttcgccacgagtgacctc
aacgacctctaccgccgcgtcatcaaccgcaacaaccgcctcaagcggctcatggacctg
ggcgccccgacgatcatcgtcaacaacgagaagcgcatgcttcaggacgccgtcgacgcc
ctgttcgacaacggccgccgcggccgcccggtcaccggcgtgggcaaccgtccgctgaag
tccctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctcctgggcaag
cgcgtggactactccggccgtagcgtcatcgtcgtcggcccccagctcaagctccaccag
tgcggtctgcccagccagatggccctggagctgttcaagcccttcgtcatgaagcggctc
gtggagctcaaggaggcccagaacgtcaaggccgccaagcgcatggtcgagcgcgccaac
cccaaggtctgggacgtcctggccgaggtcatccgcgagcaccccgtgctgctcaaccgc
gcccccaccctgcaccgcctgggcatccaggccttcgagccccagctcatcgagggcaag
gccatccagctgcacccgcttgtgtgcggcgccttcaacgccgacttcgacggcgaccag
atggccgtccacctcccgctgggcgccgaggcgcaggccgaggcccgcatcctcatgctg
tcctcgaacaacatcctcaagccctccgacgggcgccccgtgaccatgcccagtcaggac
atgattatcggcacctactacctcacctccgaccccgacccggcggtcgaggtcgagcgc
gacgccgagggcaacgagatcgtcccggccttctcctccttcgcggaggcggttatggcc
tacgacttcggcaagctccacgtcaacgccgcctgcgacatccgcttcgaggagggcatc
gccgctcccgagggctggcagccgcccgagggctggagcgagggcgacccgatcaccctg
cgcacctcgctgggccgggccctgttcaacacctcgctgcccgagaccttcccctacgtc
aactacatcgttgacaagaagcagctgggcaacatcgtcaacgccctggcggagaactac
tcgcgcgtggaggtggccgcctccctggacgccctcaaggccaacggcttctactggtcc
acctggtccggtatcaccgtcgccttcgccgacgtcgtctccccggaggccaagcaggag
atcctggttcgctacgagaacgaggccgctgagatcgaggagcagttcgagctcggtgcc
ctcaccgaggacgaccgctacgcctccctcatcgacatctggaccaaggccaccgccgag
gtcgccgaggcgatgcgtgagaacttcccgcagcgcaacaccgtctaccagatggtggtc
tccggggcccgaggcaactgggaccagatccgccagctcgccggtatgcgcggcctggtg
gccgaccccaagcagcgcctcatcgagcgcccgatcaagtcgaactaccgcgagggcctg
agcgtcctggagtacttcatcgccacccacggcgcccgtaagggcctggctgacacggcg
ctgcgtaccgccgactccggctacctcacgcgccgtctggtcgacgtctcccaggacgtc
atcgtccgcgaggaggactgcggcacccgcaagggcctgaccaagcggatcttctcctgg
atcgacgccggcgacgagcgcatcaaggagccctcggagatcctgggcaccaccgtgttc
ggcaccaccctggcgcgcgacgccatcgacgccgagggcaacctcatcatcgaggccggc
gccgacctgggtgacgccgagatccaggccgccatcgacgcgggcatcgaggagatcacg
gtgcgctccgtgctcacctgcgactccaacgtcggcacctgcgccgcctgctacggccgc
tcgctggccaccggtaagcgcgtggacatcggtgaggccgtcggcatcatcgccgcccag
tccatcggtgagcccggcacgcagctgaccatgcgtaccttccacaccggtggcgcggcc
ggcgccgccgacatcacccagggtctgccccgtgtgcaggagctcttcgaggcccgcacc
cccaagggcgaggccgccgtggccgaggccgccggcaccctcaagatcgaggacgacgcc
gacggcaagcgcctggtcatcacccgcgacgacggtgaggaggacgtcatcgtcccggtc
tcgcgccgtcagcgcctgctggtgaacgacggggaccacgtcgagcccggccaggccctc
accgagggtccggtcgaccccaagaaggtcctgcgcctgcgctcggtggccgccacccag
cgccacctcgtcgaggaggtccaggaggtctaccgctcccagggcgtggacatccactcc
aagcacatcgaggtcatcgtgcgtcagatgctgcgccgcgtgaccgtgctggactccggg
gacacccgcctcctccagggcgacctcgtggacgtcatgcactaccgcgccgagaaccgc
cgggtcatggccgagggcggcaagaccgccactggccgtaccgagctcatgggaatcacc
aaggcctcgctggccacggactcctggctgagcgccgcctccttccaggagaccacccgc
gtgctcaccgaggccgccatgaacggcaagtccgacccgctgctgggcctcaaggagaac
gtcatcctcggtaagctcatccccgccggtacgggcctggcccgctactcggacatcgag
gtcgagcccaccgaggaggtcaaggcggaggtcttctcccgcgtggacctgggagacggc
gtcttcggcgagtccgtcgccctggacgacttccacttcggcggggacctgcgtgcggac
ttctccgacgacttccgcaccggcttctccagcagcgaggacgtcgagttctga
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integrated database retrieval system
