Acetobacter orientalis: AcetOri_orf03395
Help
Entry
AcetOri_orf03395 CDS
T06324
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aot
Acetobacter orientalis
Pathway
aot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AcetOri_orf03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aot03021
]
AcetOri_orf03395
03019 Messenger RNA biogenesis [BR:
aot03019
]
AcetOri_orf03395
Transcription machinery [BR:
aot03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AcetOri_orf03395
Messenger RNA biogenesis [BR:
aot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AcetOri_orf03395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
AAA_22
AAA
Fungal_virus_P2_C
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BBC80607
LinkDB
All DBs
Position
complement(2021627..2022922)
Genome browser
AA seq
431 aa
AA seq
DB search
MHLAELKAKSPADLLACAEDLNIENASSLRKQDMMFAILKALADNDQAIYGDGTLEILHD
GFGYLRSPESNYLPGPDDIYISPTQVRRFGLRTGDTVEGQIRAPRDGERYFSLLKINSIN
FEPPEAVRHRINFDNLTPLYPERRLQMEVESAAPPVAETKGKKGKSTQDFTPRVIDLVAP
IGMGQRALIVAPPRTGKTVMLQSIASSISANHPECFLIVLLIDERPEEVTDMARSVRGEV
ISSTFDEPAHRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTG
GVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDR
KLADKRTFPAIDITKSGTRKEEMLVDRATLSKMWVLRRILAPMGTMDAMDFLLDKLKYSK
SNNDFFEAMNN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttgcggaactcaaggccaaatctccggccgaccttctagcctgcgccgaagac
ctgaatatcgaaaacgcatcctccctgcgcaagcaggacatgatgttcgctattctcaag
gcgctggcagacaacgatcaggccatttacggtgatggcacgctcgagattttgcacgac
gggtttgggtatctccgctctcccgagtctaactacctgcccggcccggacgatatttat
atctcccccacacaggtgcgccgctttggcctgcgcacgggcgacacggttgaagggcaa
attcgcgcaccacgtgatggtgagcgttatttctcactccttaaaatcaacagtatcaat
tttgaaccgccagaggccgtacgccaccggatcaactttgataacctgaccccgctttac
cccgagcgccgccttcagatggaagttgagagcgctgccccgccggttgcagaaaccaag
ggtaaaaaaggcaaaagcacccaagactttaccccccgcgtgatagaccttgtggccccc
attggtatgggccagcgcgcccttattgtggccccaccgcgcactggtaaaacggtcatg
ctgcaaagcattgcctcctccatttctgccaaccaccccgaatgcttcctgattgtgctg
ctcattgatgagcgccctgaagaagtaaccgacatggcccgctctgtgcgtggcgaagta
atttcttctacctttgacgagccagcacaccgccacgtgcaggtaaccgaaatggtgctg
gaaaaagccaaacgtctggttgagcacaaacgcgacgtggttattctgctcgactccatt
acccgtctggcccgtgcttacaacactgttgtgccatcatctggtaaagtcttgaccggt
ggtgtggacgccaacgccctacagcggcccaaacgcttctttggtgcggcccgtaatatt
gaagaaggcggctctctcaccattattgcgaccgcgctcattgataccggcagccgtatg
gacgaagtgatctttgaagaattcaaaggcacgggtaactctgaactgattcttgaccgg
aaactggctgacaagcgcaccttcccggccattgatattacaaagagtggcacccgtaag
gaagaaatgctggttgaccgcgctaccctgtctaaaatgtgggtgctgcgccgtattctg
gcccctatgggcacaatggatgccatggacttcctgctcgacaagctcaaatacagcaag
tcgaacaatgacttctttgaagccatgaataactaa
DBGET
integrated database retrieval system
