Acetobacter orientalis: AcetOri_orf03473
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Entry
AcetOri_orf03473 CDS
T06324
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aot
Acetobacter orientalis
Pathway
aot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AcetOri_orf03473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aot03019
]
AcetOri_orf03473
03009 Ribosome biogenesis [BR:
aot03009
]
AcetOri_orf03473
Enzymes [BR:
aot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AcetOri_orf03473
Messenger RNA biogenesis [BR:
aot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AcetOri_orf03473
Ribosome biogenesis [BR:
aot03009
]
Prokaryotic type
rRNA helicases
AcetOri_orf03473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
PRP38_assoc
Motif
Other DBs
NCBI-ProteinID:
BBC80655
UniProt:
A0A2Z5ZJU7
LinkDB
All DBs
Position
complement(2063279..2065120)
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AA seq
613 aa
AA seq
DB search
MPFQNAPASLASALAARGYDSATPVQAAVIAPEAEGRDLLVSARTGSGKTVAFGLAMAST
LLEDNGRCPLPGAPLALVIAPTRELALQVRNELEWLYGQTGARIVSCVGGMEPRKEARAL
SAGCHIVVGTPGRLCDHLSRGQLNLSNLRAVVLDEADEMLDLGFRDELETLLKAMPDTRR
TLLFSATIARDIAALARRYQNDALRIDTQTGSAPHSDISYRAILTDQGDMAGTIVNVLRL
IESQTAIVFCHTREAVRQLQAILTERGFSSVAISGDLGQNERSRAIESLRHGQARVCVAT
DVAARGIDIPDLGLVIHASLPSNPATLLHRSGRTGRAGRKGTCVLLVPQSRRRLAERLLE
AAKVEAEWSGAPTPEAIATADAERLLASPALNVDVPEAGETHDLIAKLAESHSAQQLAAA
LISMWRESLPTPASVRVLSPGSVKKTRERTRDGDRPERGERGERAERGPREAGSWFRLSV
GREDRADPKWLVPMLCRLGGIKKQDIGAIRIQPDHTLVEIAQDKAERFQSCAAATDPDEI
KVEPAEAPRQGGGGGGYRGKPAGGGGGRDRDRDRDRDRDRDRDGKRPPRKGGGGGFGGGG
GKPASSSRKRKSF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcaaaacgcccccgcctctctcgcgagcgctcttgccgctcgtgggtacgat
tccgcaacccctgttcaggccgctgtcatagcgcctgaagccgaggggcgggacctgctg
gtttctgcccgcacgggctctggtaaaaccgttgccttcggtcttgccatggccagtacc
ctgcttgaagacaatggccgctgcccgctacccggcgcaccgctggcccttgttattgcc
cctacccgtgagcttgccctgcaagtgcgtaacgagcttgaatggctttacggccagact
ggcgcgcgcattgtgtcttgcgtgggcggtatggaaccccgcaaagaagcccgtgccctg
tctgccggttgccacattgttgtgggtacacccggccgcctgtgcgaccatctgtctcgt
gggcagttaaacctgtctaacctgcgtgccgttgtactggacgaagccgacgaaatgctg
gatcttggctttagagatgagctggaaaccctgctcaaagctatgccggacacacgccgc
acgctgctgttttctgccaccattgcgcgtgacattgcagcccttgcccgccgctaccaa
aacgatgccttgcgcattgacacccagaccggcagcgccccccacagcgacattagctac
cgcgccatcttgaccgaccaaggtgatatggctggcactattgttaacgtgctccgcctt
atcgagtcgcaaaccgctattgtgttctgccacacgcgtgaagcagtgcggcagttgcag
gctatcttgaccgagcgcgggttctcctctgtcgctatttcaggtgaccttgggcaaaat
gagcgtagccgcgccattgaaagcctgcgccacgggcaagcccgcgtgtgcgttgccaca
gacgttgcggcacgcggtattgatattccagaccttgggctggttatccatgcaagcctg
ccgtctaacccggcaacactgttgcaccgctctggccgtactggccgtgctggccgcaaa
ggcacatgcgtgctgttggtgccacaaagccgccgccgcttggcagagcgcctgcttgaa
gccgccaaggtagaagccgaatggagtggcgcccccaccccagaagccattgccacagcc
gatgcagagcgcctgcttgcttctcccgcactgaatgtagacgtgccagaagcgggtgaa
acacacgacctgattgccaagctggcagaaagccactctgcccagcagttggccgcagca
cttatttctatgtggcgcgaaagcctgccaacaccagccagcgtacgtgtgctctccccc
ggctcggtgaaaaaaacgcgcgaaagaacccgcgatggtgaccgcccagagcgtggcgaa
cgcggtgagcgtgcagaacgtggcccgcgtgaagctggctcttggttccgcctgtctgtt
ggccgcgaagaccgcgcagaccctaaatggcttgtgcctatgctgtgccgcttgggtggc
attaaaaagcaggacattggggccattcgtatccagccagaccacacactggttgaaatt
gcacaagataaagccgaacgcttccagtcttgtgcagccgcgacagacccagacgaaatt
aaagtagaacccgctgaagccccccgtcagggcggcggtggtggcggctaccgcggcaag
cccgctggtggcggtggcggccgtgatcgtgatcgtgatcgtgatcgtgatcgtgatcgt
gatcgtgacggcaagcgcccaccccgtaaaggcggcggcggcggttttggtggcggtggt
ggcaaaccagcctcctcctcccgcaagcgcaaaagcttctaa
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