Acetobacter orientalis: AcetOri_orf04381
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Entry
AcetOri_orf04381 CDS
T06324
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aot
Acetobacter orientalis
Pathway
aot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AcetOri_orf04381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aot03019
]
AcetOri_orf04381
03009 Ribosome biogenesis [BR:
aot03009
]
AcetOri_orf04381
Enzymes [BR:
aot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AcetOri_orf04381
Messenger RNA biogenesis [BR:
aot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AcetOri_orf04381
Ribosome biogenesis [BR:
aot03009
]
Prokaryotic type
rRNA processing factors
AcetOri_orf04381
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BBC81231
UniProt:
A0A2Z5ZKZ8
LinkDB
All DBs
Position
complement(2613820..2616642)
Genome browser
AA seq
940 aa
AA seq
DB search
MDGNRLEDYDVEAAAKKQLKGNIYLARVIRVEPSLQAAFVEYGGNRHGFLAFSEIHPDYY
QIPVADREKLLALQAEEEALIDADEDNEDTDAQDLNAEADDEDAEQSDEQETAEAEADGS
ENRRAPRRNGGPDYVGGETDTGEEALIQKRIARFLRNYRIQEVIRRRQVLLVQVVKEERG
NKGAALTTYVSLAGRYCVLMPNALRGGGVSRKITSVADRRRLRDIISDLNLPRGMAMIVR
TAGAQRPGPEITRDCEYLLHLWDDIRELTLQSVAPALIYEEASLVKRAIRDVYTREISEI
LVDGESGWKAARDFMRLLMPQHAEKVRLWNKENQPLFTHYHVEGHLDAMFSPVVSLRSGG
YLVINQTEALVAIDVNSGKSTNQRNIEETAFRTNQEAADEVARQLRLRDLAGLIVIDFID
MESRRHNVMIERRLKEALRHDRARIQMGGISHFGLLEMSRQRLRPSVAEAVFAPCPHCQG
TGMVRGIESSALHVLRSVEEEGARRRASAITVHVAPEIAFYILNNKRTWLAEIEKRHYME
VLFAPDSSLPAPEVRIERLQPARVQRAPAPIQPPLENVAIEHTPVEAPAELDEVEEPRQT
ATPENATAATPDEDEPRRRRRRRRRRGGNGNRDERTPQAEQHEQNTHANAPESEADEQPE
TYTVEEANGENLAPGRRRTRHSRVQRQPQQEVQVQVPIAQGPAPRQEQRRPSQVWQGPTP
ANPFGGSIDIFDLIENSTMQAEEARKAAPVAQPAKGEAAVVAPTPAPVAAPVQPAKVEAE
PEEAEAQPARRRAPRRRRKTEETSTESNDLLADTAPVAVSPAAEADSVQDEDEAPKPRRR
RAPRKTAEADAAPEASTEEKPRATRGRPRRKAEGTDEAADAAEAEKPAPRRRRAATKAEP
AKTEAAAEPDAQAADPSIVQPIVIDDEQPAPRRRTGWWRR
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaacagacttgaagattacgatgttgaagctgctgccaaaaagcagctcaaa
ggcaacatctatctcgcccgcgttatacgggtagagcctagccttcaggcagcttttgtt
gagtatggcggcaaccgccacgggtttttggcctttagcgaaattcacccggactactac
cagattccggtagcagaccgcgagaaactgcttgccctgcaagcagaagaagaagcgctg
attgatgctgatgaagacaacgaagacacagacgcccaagacctaaacgctgaagcagac
gacgaagacgctgaacagagcgacgagcaagaaaccgctgaagcagaggcagacggcagc
gaaaaccgccgtgccccacgccgcaacggtggcccagactatgttggcggcgaaaccgac
accggcgaagaagcgcttattcaaaagcgtattgcccgcttcttgcggaactaccgcatt
caagaagtcatccgccgccgtcaggtcttgctggtgcaggtggttaaagaagaacgtggc
aacaagggcgctgcccttacaacctacgtgtctttggctggccgctactgcgtgcttatg
cctaacgccctgcgcggcggtggcgtttctcgcaaaattacctctgtggcagaccgccgc
cgcctacgcgacattatttcagacctcaacctgccacgcggcatggccatgattgtgcgt
accgctggcgcacaacgccccggccctgaaattacccgagattgcgagtacctgctgcat
ttgtgggacgacattcgcgaactcacgctgcaatccgtagcgccagcgctcatttatgaa
gaagcaagcctcgttaaacgcgccattcgagacgtttacacgcgcgaaattagcgaaatt
ctagttgacggtgaatctggttggaaagccgcgcgtgacttcatgcgcctgcttatgccc
cagcacgctgagaaagtgcgcttgtggaacaaggaaaaccagccgctctttacccattac
catgtggaagggcacctagacgccatgttctcccccgtggtgtctctgcgctctggcggg
tatctggttatcaaccagaccgaagctctcgtggctatagacgtaaactctggcaaatct
accaaccagcgtaacattgaagaaacggccttccgcaccaaccaagaagccgccgatgaa
gttgcacgccaactccgcctgcgtgaccttgctggccttattgtcattgacttcattgac
atggaatcccgccgccacaacgtcatgatcgagcgccgccttaaagaggcactgcgccac
gaccgcgcacgtattcaaatgggtggcatttcacactttggcctgctcgaaatgtctcgc
cagaggctgcgcccttctgtggcagaagccgtttttgccccctgcccccactgtcagggc
acaggcatggtacgcggcatagaaagctctgccctgcacgtgctgcgcagcgtagaagaa
gaaggcgcacgccgccgcgcttctgccattacggtacatgtggcgccagaaattgctttc
tatattcttaacaacaaacgcacgtggttggctgaaattgaaaaacgccactacatggaa
gtgctgtttgccccagattccagcctacctgcaccagaggtgcgcattgagcgcctgcaa
ccggcccgcgtacagcgtgcaccggcccctatacagcccccgctcgaaaatgtggccatt
gagcacacacccgtagaagcaccagccgagctagacgaggttgaagaaccccgccaaact
gcaacgcctgaaaacgctacagcggccacgcctgacgaagacgaaccccgccgccgccgc
cgccgccgtcgccgccgtgggggtaatggcaaccgcgatgaacgcacaccacaggcagag
cagcacgagcaaaacactcatgctaacgcgccagaatctgaagccgatgaacagcccgaa
acctacacggttgaagaggcaaacggcgaaaatctggcccccggccgccgccgcacacgt
cattctcgcgtgcagcgtcagcctcagcaagaagtgcaagtgcaggtgcctatcgcacaa
ggcccggccccccggcaggaacagcgccgcccaagccaagtctggcaggggccaacccca
gccaacccgtttggcggcagcattgatattttcgacctgatcgaaaatagcaccatgcag
gcagaagaagcccgcaaagctgcccctgtggcgcaaccggccaaaggtgaagctgctgtg
gtagcccccacacctgctcctgttgcggcacctgtacagcctgcaaaagttgaagccgag
ccagaagaagctgaggcccaacctgcacgccgccgggcaccgcgccgccgccgcaaaaca
gaagaaaccagcacggaaagcaacgacctgctggcagacactgcccctgtagcggtaagc
ccagcagccgaagcggacagcgtgcaagacgaagacgaggcccctaagccacgccgccgt
cgcgcaccccgcaaaacagccgaggcagacgcagccccagaagccagcacggaagaaaaa
ccccgtgcaactcgtggccgcccccgccgcaaagctgagggaacggatgaggcagcagac
gcagcagaagctgaaaaaccagccccacgccgccgccgcgctgccacaaaggctgaacct
gctaagacagaagctgccgccgagccagacgcgcaagccgcagacccgtctattgtgcag
cccatcgttattgatgatgagcagccagccccacgccgccgcacaggctggtggcgccgc
taa
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