Acetobacter orientalis: AcetOri_orf05010
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Entry
AcetOri_orf05010 CDS
T06324
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aot
Acetobacter orientalis
Pathway
aot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AcetOri_orf05010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aot03021
]
AcetOri_orf05010
03400 DNA repair and recombination proteins [BR:
aot03400
]
AcetOri_orf05010
Enzymes [BR:
aot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AcetOri_orf05010
Transcription machinery [BR:
aot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AcetOri_orf05010
DNA repair and recombination proteins [BR:
aot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AcetOri_orf05010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
BSH_YknX
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
BBC81656
LinkDB
All DBs
Position
3013726..3017670
Genome browser
AA seq
1314 aa
AA seq
DB search
MKFRGIVCEKCGVEVTLAKVRRERMGHIQLASPVAHIWFLKSLPSRIGLMVDMTLKDLEK
VLYFENYLVLEPGTSPLKQYSLLSEEQYLDVMDEYSEEGIEVGIGAEAIKKVLERIDCDA
EKVELRQELKETTSEAKRKKLVKRLKLIEAFAESGSRPEWMILDYVPVIPPELRPLVPLD
GGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRMLQEAVDALFDNGRRGRAI
TGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEMKLHQCGLPKKMALEL
FKPFIYSKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREHPVMLNRAPTLHRLGIQA
FEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANG
KPIIVPSQDIVLGLYYLSLEVPEFAATPDRNEYDNETGALVKEGAPSFSSIGEVEYALNA
GVLKLHDKIRARFEAIKDGQKTYETVVTTPGRVLIAQILPKSEAIPFSLINKQLTKKAVS
DVIDTVYRHCGQKEAVIFCDRLMALGFRHAAKAGISFGKDDMIIPAEKKVLVDRTAAEVK
EFEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMTKEISRQEIGKPINSVWMMSHSGAR
GSPAQMKQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLDYFTSTHGARKGLADTALKTA
NSGYLTRRLVDVAQDSIIIEEDCGTERGLTVRAVLDGGEVVASLSERILGRTAAADIVDP
ATGAVIVARNQLIEEADAERIENAGIESVFIRSVLTCDSRVGVCGHCYGRDLARGTPVNI
GEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSMIEASRDGKVVIRNRNVVHNSQN
VPIVMARNCEILLTDETGAEKARYRVPYGARLLTADGETVARGQKLAEWDPYTLPIITEK
AGKIEYLDLIDSITLVERMDEVTGLTSKVVVDYKQAGKGVDLRPRVQLKDANGDVVKLDN
GNDARYFLSPETLLTIENGAEVHAGDVLARLPREGSKTRDITGGLPRVAELFEARRPKDH
AIIAEMEGRVEFGKDYKSKRRVIVKNDETGEETEYLIPKGKHVSVQEGDFVEKGDPLVDG
PRVPHDILKVMGVEALSDYLVNEIQDVYRLQGVKINDKHIEVIVRQMLQKVEILEPGDTT
YLIGETVDRIEFDVENTKCLNAGERPALAMPVLQGITKASLQTQSFISAASFQETTRVLT
EAATAGKVDRLNGLKENVIVGRLIPAGTGSVMNRLRAIAASQDRQRVGRSSAAE
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgcggtattgtgtgcgaaaaatgtggcgttgaagttacgctggctaaagtg
cgtcgtgaacgcatgggtcatattcagcttgccagccctgttgcccatatctggttcttg
aagtctctgcctagccgtatcggcctgatggtcgatatgacgctcaaagaccttgagaaa
gttctctacttcgaaaactatcttgttcttgaacccggtacgtctccgcttaagcagtat
tctctgctgagcgaagagcagtatctcgacgttatggacgagtatagcgaagaaggtatc
gaagtcggtatcggtgctgaggcgatcaagaaggtgctggaacgcatcgattgtgatgct
gaaaaagttgaactgcgtcaggaactgaaggaaaccacttcagaagctaagcgcaaaaaa
cttgttaagcgcctcaagctgattgaagctttcgctgaaagtggctcacgccctgagtgg
atgattctggactatgtgccagttatcccaccagaactgcgcccattggtaccgcttgat
ggtgggcgttttgcaacgtctgacctcaacgacctgtaccgccgtgttattaaccgtaat
aaccgccttaaacgcctgatggagctgcgtgcgcccgatattatcgtgcgtaacgaaaag
cgtatgcttcaggaagctgttgacgccctgtttgataacggccgccgtggccgtgctatt
acaggtgccaacaagcgtccgctcaagtctctgtctgatatgctgaaaggcaagcagggt
cgcttccgtcagaaccttttgggtaaacgcgttgactactctggccgttcggtcattgtg
gttggcccggaaatgaagctgcaccagtgcggcttgcccaaaaagatggcgctggaactg
ttcaagccgttcatctactccaagctggaaaagtacggccacgctacaaccattaaagct
gcaaagcgtatggttgaaaaagagcgtccggaagtttgggatattcttgaagaagttatc
cgcgaacatccggttatgcttaaccgtgcgccaacacttcaccgtcttggtattcaggcg
ttcgaaccgatcttggttgaagggaaagctattcagcttcacccgcttgtctgtactgcg
tttaacgccgactttgacggcgaccagatggccgtgcacgtacccctgagccttgaggcc
cagttggaagcgcgtgtgctgatgatgtctaccaacaacattctgagcccggcaaacggt
aagcctattatcgtgccatctcaggatattgttctgggtctgtattatctgagccttgaa
gtaccggaatttgcagcaacgccagaccgtaacgaatacgacaacgaaaccggtgcattg
gtaaaagaaggcgctccgtctttctcttcaatcggtgaagttgagtatgctctgaacgct
ggtgttttgaagctgcatgataaaattcgtgcccgctttgaagctattaaagacggccag
aaaacatacgaaacggttgtaacaacaccgggccgtgtgctgatcgctcaaattttgcca
aaaagcgaagccattccgttctcgctcattaacaaacagctgaccaagaaagctgtgtct
gacgttattgacacggtctaccgtcattgcggccagaaagaagcagttatcttctgtgac
cgtctgatggcacttggtttccgccacgctgctaaagctggtatttctttcggtaaggat
gacatgatcattccagccgaaaagaaagtactggttgatcgtaccgctgctgaagtgaaa
gagtttgaacagcagtatcaggatggtctgattaccgctggcgaacgctacaacaaagtg
gttgacgcttggtcacgttgcacagacgaagttcaagcggctatgaccaaggaaatttcc
cgtcaggaaattggtaagccaatcaactctgtgtggatgatgagccactctggtgcgcgt
gggtcaccggctcagatgaagcagcttgctggtatgcgcggtctgatggccaaaccatct
ggtgagattattgaacagccgattattgccaactttaaagaaggcttgtcggttctcgat
tactttacgtctacccatggtgcacgtaagggtcttgctgataccgcgctgaaaactgct
aactctggttacctgacccgtcgtttggttgacgttgcgcaagacagcatcatcattgaa
gaagattgcggtactgaacgcggtctgacagtacgtgccgtgctcgacggcggtgaagtt
gttgcgtctctgtctgagcgtattctcggtcgtacagcggctgcggatattgttgaccca
gcgacaggcgcagtcattgttgcacgtaaccaactgattgaagaagctgatgctgagcgt
attgaaaacgctggcattgagtctgttttcattcgctctgtgctgacctgtgacagccgg
gtaggggtctgtggccattgctacggtcgtgaccttgcacgcggtacgccggtgaacatt
ggtgaggcagttggtgttattgctgcacagtccattggtgagcccggtacacagcttacc
atgcgtaccttccatattggtggtgcggcccagcgtggtgctgaacagtccatgatcgaa
gcctcccgcgatgggaaggtggtgatccgtaaccgtaacgttgtgcataactcgcaaaat
gtgcccatcgtgatggcgcgtaactgtgaaattctgctgacggatgaaaccggtgcagaa
aaagcacgctaccgcgtaccttacggtgctcgcctgctgactgctgatggggaaacggtt
gcccgtggccagaaactggctgagtgggacccctacaccctgccaatcatcacggaaaaa
gccggtaagatcgagtatcttgaccttattgactccattaccctcgttgagcgtatggac
gaagtgaccggcctgacctctaaagtggtggttgactataaacaggcaggtaagggtgtt
gatctgcgtcctcgtgtgcagcttaaagatgcaaacggcgatgtggtgaagctggataac
ggtaacgatgcgcgttacttcctgtcacctgaaacactgctgaccattgaaaatggcgca
gaagtgcatgccggtgacgttctggcccgtctgccacgagaaggttctaaaacgcgtgac
attaccggtggtctgccgcgcgttgcagaactctttgaagcacgtcgcccgaaagatcat
gccatcatcgctgagatggaagggcgtgttgagttcgggaaagattacaagtctaaacgt
cgtgttatcgtgaaaaacgatgagacgggtgaagagaccgaatatctgatccctaaaggc
aagcacgtttccgttcaggaaggtgactttgttgaaaagggtgacccgttggttgacggc
ccccgcgtaccgcacgatattctgaaagttatgggggttgaggctctgtccgactacctc
gtaaacgaaattcaggatgtgtaccgtctgcagggcgtgaagattaacgataagcacatt
gaggttattgtgcgtcagatgcttcagaaagtagaaattctggagccgggcgatacaaca
tacctgattggtgaaaccgttgatcggattgagtttgatgttgagaacacgaagtgcctg
aacgctggtgagcgtcctgcattggctatgccggtgctacagggtattaccaaggcttct
ctacagacacagtccttcatctctgccgcgtctttccaggaaaccacgcgtgtcctgacc
gaagctgcgacagcaggtaaggttgaccgcttgaacggcctgaaagaaaacgtgattgtg
ggtcgtttgatcccggctggtacggggagtgttatgaatcgcttgcgggcgattgcagcc
tctcaagaccggcagcgtgttggtcggtcatcagcggctgaataa
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