Actinoplanes oblitus: ACTOB_001627
Help
Entry
ACTOB_001627 CDS
T09687
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aou
Actinoplanes oblitus
Pathway
aou03030
DNA replication
aou03430
Mismatch repair
aou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACTOB_001627
03430 Mismatch repair
ACTOB_001627
03440 Homologous recombination
ACTOB_001627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aou03032
]
ACTOB_001627
03400 DNA repair and recombination proteins [BR:
aou03400
]
ACTOB_001627
Enzymes [BR:
aou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACTOB_001627
DNA replication proteins [BR:
aou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACTOB_001627
DNA repair and recombination proteins [BR:
aou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACTOB_001627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
CcFV1_CP
Motif
Other DBs
NCBI-ProteinID:
WIM98055
UniProt:
A0ABY8WQJ0
LinkDB
All DBs
Position
complement(1762514..1764325)
Genome browser
AA seq
603 aa
AA seq
DB search
MFPAVAQPAYVQGTLDTLLSADGSVDPAAVSLADTTFVVLDLETTGGAPDGGGITEIGAV
KVRGGQRLGEFGTLVNPGEPLPPFITVLTGITEAMLRPAPPIETVLPALLEFLRGAVLVA
HNAPYDVGFLKAACARHGYPWPAPRVLDTAALARRALTRDEVPNRKLGTLAHFFRSTVEP
NHRALDDAKATVDVLHGLIERLGSYKVHTLGDAIEFAKAITPAQRNRRHLADNLPHVPGV
YIFRAADDRPLYVGTSKDVATRVRSYFTAGEKRARISEMLTAAVRVEAVECAHALEAEVR
ELRLIASHAPPYNRRSKYPERMVWLKLTAEAFPRLSVVRRFADDGGTYLGPFSSRRTAEL
AAAGVYDAVPLRQCNHKLSLRVKTPACALAELGRCPAPCEHEITREDYDVRAALPFRVAT
SGDPGPVIEAILARIDTLSDRQRYEEATTLRSRLIALLRALIRMQKLDALTRLPEIVAAR
RNDKGGWEIAVVRHGRLAAAATSPPREHPRPTLDAAKLTAETVLPGPGPVPAASAEETER
VLAWLERVDTRLVETSGDWVSPARGAARFTALLSRAEAAASAQDSTVRLSVTDRSDDARS
LRL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttcccggccgtggcacaaccggcttatgtgcagggcactctggacacgctgctgtcc
gccgacggctcggtggatccggccgccgtctcgctcgccgacaccacgttcgtggtgctc
gacctggagaccaccggtggcgctccggacggcggcgggatcaccgagatcggcgcggtc
aaggttcgtggcggccagcggctgggcgagttcggcacgctggtcaacccgggtgagccg
ctgccgccgttcatcaccgtcctgaccggcatcaccgaggcgatgctgcgccccgccccg
ccgatcgagacggtgctgccggccctgctggagttcctccgcggcgccgtgctggtcgcc
cacaacgcgccctacgacgtggggtttctcaaggccgcctgcgcccggcacggctatccg
tggccggcgccccgggtgctggacaccgccgcgctggcccgccgcgcgctgacccgcgac
gaggtgccgaaccggaagctcggcaccctggcccacttcttccggtccaccgtcgagccc
aaccaccgggcgctggacgacgccaaggccacggtcgacgtgctgcacggcctgatcgag
cgcctgggcagctacaaggtgcacaccctgggcgacgcgatcgagttcgccaaggcgatc
accccggcccagcgcaaccgccggcacctggccgacaacctgccgcacgtccccggggtc
tacatcttccgcgccgccgacgaccgcccgctctacgtcggcacctccaaggacgtcgcc
acccgggtgcggagctatttcaccgccggcgagaaacgcgcccggatctccgagatgctc
accgcggcggtccgggtggaggcggtggagtgcgcccacgcgctcgaggcggaggtgcgg
gagctgcgcctgatcgcctcgcacgccccgccgtacaaccgccgttccaagtacccggag
cggatggtctggctgaagctgacggccgaggcgttcccgcggctgtcggtggtccgccgg
ttcgccgacgacggcgggacctacctgggcccgttctcctcccggcgcaccgctgagctg
gccgccgccggggtctatgacgccgtgccgctgcgacagtgcaatcacaagctctcgctg
cgggtgaaaactccggcctgcgccctggccgagctgggccgctgcccggcgccgtgcgag
cacgagatcacccgggaggattacgacgtgcgggccgccctcccgttccgggtcgccact
tcgggggaccccggtccggtgatcgaggcgatcctggcccgcatcgacacgctcagcgac
cggcagcgctacgaggaggccaccaccctccgctcccgcttgatcgccctgctgcgggcg
ctcatccggatgcagaaactggacgcgctgacccggctgccggagatcgtcgccgcccgg
cggaacgacaagggtggctgggagatcgccgtggtgcggcacggccggctggccgcggcg
gccacctccccgccccgtgagcacccgagacccaccctggacgcggcgaaactgacagcc
gagacggtccttcccggaccgggcccggtgccggccgcgtccgccgaggagaccgagcgg
gtcctcgcgtggctggagcgggtggacacccgcttggtggaaacctccggcgactgggtg
tcaccggcccgtggcgcggcgcgattcaccgccctcctcagcagggccgaggcggccgct
tcggcccaagactcgaccgttcgcctatcagtaactgaccgttcggatgacgctcgctcg
cttaggctgtaa
DBGET
integrated database retrieval system
